Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp1bQ9EPL6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Mmp1bQ9EPL6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp1bQ9EPL6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp1bQ9EPL6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp1bQ9EPL6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Mmp1bQ9EPL6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp1bQ9EPL6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp1bQ9EPL6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.88■□□□□ 0.93
Mmp1bQ9EPL6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp1bQ9EPL6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.88■□□□□ 0.93
Mmp1bQ9EPL6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp1bQ9EPL6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.87■□□□□ 0.93
Mmp1bQ9EPL6 Zfp131-205ENSMUST00000223812 663 ntBASIC20.87■□□□□ 0.93
Mmp1bQ9EPL6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp1bQ9EPL6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp1bQ9EPL6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp1bQ9EPL6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp1bQ9EPL6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp1bQ9EPL6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp1bQ9EPL6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.85■□□□□ 0.93
Mmp1bQ9EPL6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Mmp1bQ9EPL6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp1bQ9EPL6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp1bQ9EPL6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp1bQ9EPL6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp1bQ9EPL6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp1bQ9EPL6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp1bQ9EPL6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp1bQ9EPL6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mmp1bQ9EPL6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp1bQ9EPL6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.81■□□□□ 0.92
Mmp1bQ9EPL6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp1bQ9EPL6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp1bQ9EPL6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp1bQ9EPL6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp1bQ9EPL6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp1bQ9EPL6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp1bQ9EPL6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Mmp1bQ9EPL6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp1bQ9EPL6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Mmp1bQ9EPL6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp1bQ9EPL6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp1bQ9EPL6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp1bQ9EPL6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp1bQ9EPL6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.76■□□□□ 0.91
Mmp1bQ9EPL6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp1bQ9EPL6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp1bQ9EPL6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp1bQ9EPL6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.75■□□□□ 0.91
Mmp1bQ9EPL6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp1bQ9EPL6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp1bQ9EPL6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp1bQ9EPL6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp1bQ9EPL6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp1bQ9EPL6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp1bQ9EPL6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.74■□□□□ 0.91
Mmp1bQ9EPL6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp1bQ9EPL6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp1bQ9EPL6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp1bQ9EPL6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp1bQ9EPL6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp1bQ9EPL6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Mmp1bQ9EPL6 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.72■□□□□ 0.91
Mmp1bQ9EPL6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.72■□□□□ 0.91
Mmp1bQ9EPL6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp1bQ9EPL6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp1bQ9EPL6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Mmp1bQ9EPL6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp1bQ9EPL6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp1bQ9EPL6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Mmp1bQ9EPL6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp1bQ9EPL6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp1bQ9EPL6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp1bQ9EPL6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp1bQ9EPL6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp1bQ9EPL6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp1bQ9EPL6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Mmp1bQ9EPL6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.68■□□□□ 0.9
Mmp1bQ9EPL6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp1bQ9EPL6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.67■□□□□ 0.9
Mmp1bQ9EPL6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp1bQ9EPL6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mmp1bQ9EPL6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp1bQ9EPL6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Mmp1bQ9EPL6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp1bQ9EPL6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp1bQ9EPL6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Mmp1bQ9EPL6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp1bQ9EPL6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp1bQ9EPL6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp1bQ9EPL6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Mmp1bQ9EPL6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp1bQ9EPL6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp1bQ9EPL6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp1bQ9EPL6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp1bQ9EPL6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp1bQ9EPL6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp1bQ9EPL6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mmp1bQ9EPL6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms