Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssr3Q9DCF9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr3Q9DCF9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr3Q9DCF9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr3Q9DCF9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ssr3Q9DCF9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr3Q9DCF9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr3Q9DCF9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Ssr3Q9DCF9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr3Q9DCF9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr3Q9DCF9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr3Q9DCF9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.21■□□□□ 0.99
Ssr3Q9DCF9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr3Q9DCF9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr3Q9DCF9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssr3Q9DCF9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssr3Q9DCF9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Ssr3Q9DCF9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.19■□□□□ 0.98
Ssr3Q9DCF9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ssr3Q9DCF9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr3Q9DCF9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ssr3Q9DCF9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr3Q9DCF9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.18■□□□□ 0.98
Ssr3Q9DCF9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr3Q9DCF9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.17■□□□□ 0.98
Ssr3Q9DCF9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr3Q9DCF9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr3Q9DCF9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.17■□□□□ 0.98
Ssr3Q9DCF9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr3Q9DCF9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr3Q9DCF9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ssr3Q9DCF9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ssr3Q9DCF9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Ssr3Q9DCF9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr3Q9DCF9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr3Q9DCF9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.15■□□□□ 0.98
Ssr3Q9DCF9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr3Q9DCF9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.15■□□□□ 0.98
Ssr3Q9DCF9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ssr3Q9DCF9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ssr3Q9DCF9 Gm27322-201ENSMUST00000184007 104 ntBASIC21.14■□□□□ 0.97
Ssr3Q9DCF9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssr3Q9DCF9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssr3Q9DCF9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ssr3Q9DCF9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ssr3Q9DCF9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.12■□□□□ 0.97
Ssr3Q9DCF9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr3Q9DCF9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr3Q9DCF9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ssr3Q9DCF9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr3Q9DCF9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssr3Q9DCF9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Ssr3Q9DCF9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.1■□□□□ 0.97
Ssr3Q9DCF9 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.09■□□□□ 0.97
Ssr3Q9DCF9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr3Q9DCF9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ssr3Q9DCF9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr3Q9DCF9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssr3Q9DCF9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Ssr3Q9DCF9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ssr3Q9DCF9 Gm25262-201ENSMUST00000174934 133 ntBASIC21.07■□□□□ 0.96
Ssr3Q9DCF9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.07■□□□□ 0.96
Ssr3Q9DCF9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssr3Q9DCF9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ssr3Q9DCF9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr3Q9DCF9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr3Q9DCF9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr3Q9DCF9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr3Q9DCF9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr3Q9DCF9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr3Q9DCF9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr3Q9DCF9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr3Q9DCF9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr3Q9DCF9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr3Q9DCF9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr3Q9DCF9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.03■□□□□ 0.96
Ssr3Q9DCF9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr3Q9DCF9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ssr3Q9DCF9 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.02■□□□□ 0.96
Ssr3Q9DCF9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ssr3Q9DCF9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr3Q9DCF9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr3Q9DCF9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr3Q9DCF9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ssr3Q9DCF9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr3Q9DCF9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr3Q9DCF9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ssr3Q9DCF9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr3Q9DCF9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr3Q9DCF9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr3Q9DCF9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr3Q9DCF9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms