Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Prpf8Q99PV0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf8Q99PV0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Prpf8Q99PV0 Gm6311-201ENSMUST00000073790 878 ntBASIC19.65■□□□□ 0.74
Prpf8Q99PV0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf8Q99PV0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf8Q99PV0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.63■□□□□ 0.73
Prpf8Q99PV0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf8Q99PV0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf8Q99PV0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.62■□□□□ 0.73
Prpf8Q99PV0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf8Q99PV0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Prpf8Q99PV0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf8Q99PV0 Particl-201ENSMUST00000205370 1560 ntBASIC19.6■□□□□ 0.73
Prpf8Q99PV0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf8Q99PV0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf8Q99PV0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf8Q99PV0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf8Q99PV0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf8Q99PV0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf8Q99PV0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf8Q99PV0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf8Q99PV0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.57■□□□□ 0.72
Prpf8Q99PV0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Prpf8Q99PV0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf8Q99PV0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf8Q99PV0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.56■□□□□ 0.72
Prpf8Q99PV0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf8Q99PV0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf8Q99PV0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf8Q99PV0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf8Q99PV0 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.55■□□□□ 0.72
Prpf8Q99PV0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf8Q99PV0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf8Q99PV0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf8Q99PV0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf8Q99PV0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Prpf8Q99PV0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.51■□□□□ 0.71
Prpf8Q99PV0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf8Q99PV0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.51■□□□□ 0.71
Prpf8Q99PV0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf8Q99PV0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.5■□□□□ 0.71
Prpf8Q99PV0 Gm30023-201ENSMUST00000197970 889 ntBASIC19.5■□□□□ 0.71
Prpf8Q99PV0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf8Q99PV0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf8Q99PV0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf8Q99PV0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Prpf8Q99PV0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.49■□□□□ 0.71
Prpf8Q99PV0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Prpf8Q99PV0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf8Q99PV0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf8Q99PV0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf8Q99PV0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.48■□□□□ 0.71
Prpf8Q99PV0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf8Q99PV0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.48■□□□□ 0.71
Prpf8Q99PV0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf8Q99PV0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Prpf8Q99PV0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf8Q99PV0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf8Q99PV0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.47■□□□□ 0.71
Prpf8Q99PV0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.47■□□□□ 0.71
Prpf8Q99PV0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf8Q99PV0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Prpf8Q99PV0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf8Q99PV0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf8Q99PV0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.46■□□□□ 0.71
Prpf8Q99PV0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf8Q99PV0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf8Q99PV0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf8Q99PV0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Prpf8Q99PV0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf8Q99PV0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf8Q99PV0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Prpf8Q99PV0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prpf8Q99PV0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf8Q99PV0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf8Q99PV0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf8Q99PV0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf8Q99PV0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf8Q99PV0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf8Q99PV0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf8Q99PV0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf8Q99PV0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf8Q99PV0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf8Q99PV0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf8Q99PV0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf8Q99PV0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf8Q99PV0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf8Q99PV0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf8Q99PV0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf8Q99PV0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf8Q99PV0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf8Q99PV0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf8Q99PV0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf8Q99PV0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf8Q99PV0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.37■□□□□ 0.69
Prpf8Q99PV0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf8Q99PV0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.36■□□□□ 0.69
Prpf8Q99PV0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf8Q99PV0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 746.8 ms