Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scrt1Q99M85 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scrt1Q99M85 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Scrt1Q99M85 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scrt1Q99M85 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scrt1Q99M85 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Scrt1Q99M85 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scrt1Q99M85 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scrt1Q99M85 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scrt1Q99M85 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scrt1Q99M85 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scrt1Q99M85 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scrt1Q99M85 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Scrt1Q99M85 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.91■□□□□ 0.94
Scrt1Q99M85 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scrt1Q99M85 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scrt1Q99M85 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Scrt1Q99M85 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scrt1Q99M85 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.9■□□□□ 0.94
Scrt1Q99M85 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Scrt1Q99M85 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.89■□□□□ 0.94
Scrt1Q99M85 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Scrt1Q99M85 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scrt1Q99M85 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scrt1Q99M85 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.89■□□□□ 0.93
Scrt1Q99M85 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Scrt1Q99M85 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.87■□□□□ 0.93
Scrt1Q99M85 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scrt1Q99M85 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.86■□□□□ 0.93
Scrt1Q99M85 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scrt1Q99M85 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scrt1Q99M85 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scrt1Q99M85 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.85■□□□□ 0.93
Scrt1Q99M85 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.85■□□□□ 0.93
Scrt1Q99M85 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Scrt1Q99M85 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scrt1Q99M85 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Scrt1Q99M85 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scrt1Q99M85 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scrt1Q99M85 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scrt1Q99M85 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scrt1Q99M85 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scrt1Q99M85 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scrt1Q99M85 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scrt1Q99M85 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scrt1Q99M85 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.82■□□□□ 0.92
Scrt1Q99M85 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scrt1Q99M85 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.82■□□□□ 0.92
Scrt1Q99M85 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.81■□□□□ 0.92
Scrt1Q99M85 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scrt1Q99M85 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scrt1Q99M85 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scrt1Q99M85 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scrt1Q99M85 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scrt1Q99M85 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scrt1Q99M85 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.79■□□□□ 0.92
Scrt1Q99M85 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scrt1Q99M85 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.78■□□□□ 0.92
Scrt1Q99M85 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scrt1Q99M85 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Scrt1Q99M85 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Scrt1Q99M85 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scrt1Q99M85 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scrt1Q99M85 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scrt1Q99M85 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scrt1Q99M85 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scrt1Q99M85 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scrt1Q99M85 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Scrt1Q99M85 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scrt1Q99M85 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scrt1Q99M85 Amer2-203ENSMUST00000225247 2662 ntBASIC20.73■□□□□ 0.91
Scrt1Q99M85 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scrt1Q99M85 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.73■□□□□ 0.91
Scrt1Q99M85 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.73■□□□□ 0.91
Scrt1Q99M85 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Scrt1Q99M85 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scrt1Q99M85 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scrt1Q99M85 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scrt1Q99M85 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scrt1Q99M85 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scrt1Q99M85 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.7■□□□□ 0.9
Scrt1Q99M85 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scrt1Q99M85 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scrt1Q99M85 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scrt1Q99M85 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scrt1Q99M85 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scrt1Q99M85 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scrt1Q99M85 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scrt1Q99M85 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scrt1Q99M85 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scrt1Q99M85 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Scrt1Q99M85 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scrt1Q99M85 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scrt1Q99M85 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Scrt1Q99M85 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scrt1Q99M85 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scrt1Q99M85 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scrt1Q99M85 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scrt1Q99M85 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scrt1Q99M85 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms