Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm11599-201ENSMUST00000118720 878 ntBASIC28,8■■■□□ 2,2
Col20a1Q923P0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Col20a1Q923P0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28,79■■■□□ 2,2
Col20a1Q923P0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Col20a1Q923P0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28,79■■■□□ 2,2
Col20a1Q923P0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28,78■■■□□ 2,2
Col20a1Q923P0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28,78■■■□□ 2,2
Col20a1Q923P0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28,77■■■□□ 2,2
Col20a1Q923P0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28,77■■■□□ 2,2
Col20a1Q923P0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Col20a1Q923P0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28,76■■■□□ 2,19
Col20a1Q923P0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,19
Col20a1Q923P0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28,75■■■□□ 2,19
Col20a1Q923P0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28,75■■■□□ 2,19
Col20a1Q923P0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Col20a1Q923P0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
Col20a1Q923P0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
Col20a1Q923P0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Col20a1Q923P0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Col20a1Q923P0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28,71■■■□□ 2,19
Col20a1Q923P0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28,71■■■□□ 2,19
Col20a1Q923P0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28,7■■■□□ 2,18
Col20a1Q923P0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28,69■■■□□ 2,18
Col20a1Q923P0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28,69■■■□□ 2,18
Col20a1Q923P0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28,68■■■□□ 2,18
Col20a1Q923P0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
Col20a1Q923P0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28,67■■■□□ 2,18
Col20a1Q923P0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Col20a1Q923P0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Col20a1Q923P0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28,67■■■□□ 2,18
Col20a1Q923P0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Col20a1Q923P0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28,65■■■□□ 2,18
Col20a1Q923P0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28,64■■■□□ 2,17
Col20a1Q923P0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28,63■■■□□ 2,17
Col20a1Q923P0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Col20a1Q923P0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Col20a1Q923P0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Col20a1Q923P0 Gm43445-201ENSMUST00000198564 2091 ntBASIC28,59■■■□□ 2,17
Col20a1Q923P0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28,58■■■□□ 2,17
Col20a1Q923P0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28,58■■■□□ 2,17
Col20a1Q923P0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28,58■■■□□ 2,17
Col20a1Q923P0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Col20a1Q923P0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28,57■■■□□ 2,16
Col20a1Q923P0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Col20a1Q923P0 Particl-201ENSMUST00000205370 1560 ntBASIC28,57■■■□□ 2,16
Col20a1Q923P0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28,56■■■□□ 2,16
Col20a1Q923P0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28,56■■■□□ 2,16
Col20a1Q923P0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28,53■■■□□ 2,16
Col20a1Q923P0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28,53■■■□□ 2,16
Col20a1Q923P0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Col20a1Q923P0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28,51■■■□□ 2,15
Col20a1Q923P0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28,51■■■□□ 2,15
Col20a1Q923P0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28,51■■■□□ 2,15
Col20a1Q923P0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28,51■■■□□ 2,15
Col20a1Q923P0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Col20a1Q923P0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Col20a1Q923P0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28,47■■■□□ 2,15
Col20a1Q923P0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28,47■■■□□ 2,15
Col20a1Q923P0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Col20a1Q923P0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28,45■■■□□ 2,15
Col20a1Q923P0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28,45■■■□□ 2,14
Col20a1Q923P0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28,45■■■□□ 2,14
Col20a1Q923P0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28,44■■■□□ 2,14
Col20a1Q923P0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28,44■■■□□ 2,14
Col20a1Q923P0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28,43■■■□□ 2,14
Col20a1Q923P0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Col20a1Q923P0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28,43■■■□□ 2,14
Col20a1Q923P0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Col20a1Q923P0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28,42■■■□□ 2,14
Col20a1Q923P0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Col20a1Q923P0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28,41■■■□□ 2,14
Col20a1Q923P0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28,4■■■□□ 2,14
Col20a1Q923P0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28,39■■■□□ 2,14
Col20a1Q923P0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Col20a1Q923P0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Col20a1Q923P0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28,39■■■□□ 2,14
Col20a1Q923P0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,13
Col20a1Q923P0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28,37■■■□□ 2,13
Col20a1Q923P0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,37■■■□□ 2,13
Col20a1Q923P0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28,36■■■□□ 2,13
Col20a1Q923P0 Gm9905-201ENSMUST00000065740 1845 ntBASIC28,36■■■□□ 2,13
Col20a1Q923P0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Col20a1Q923P0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Col20a1Q923P0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28,35■■■□□ 2,13
Col20a1Q923P0 Gm6206-201ENSMUST00000133472 2199 ntBASIC28,35■■■□□ 2,13
Col20a1Q923P0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28,35■■■□□ 2,13
Col20a1Q923P0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28,35■■■□□ 2,13
Col20a1Q923P0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Col20a1Q923P0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28,34■■■□□ 2,13
Col20a1Q923P0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28,33■■■□□ 2,13
Col20a1Q923P0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28,31■■■□□ 2,12
Col20a1Q923P0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28,31■■■□□ 2,12
Col20a1Q923P0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28,31■■■□□ 2,12
Col20a1Q923P0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28,29■■■□□ 2,12
Col20a1Q923P0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Col20a1Q923P0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28,29■■■□□ 2,12
Col20a1Q923P0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Col20a1Q923P0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28,29■■■□□ 2,12
Col20a1Q923P0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28,29■■■□□ 2,12
Col20a1Q923P0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28,28■■■□□ 2,12
Retrieved 100 of 76,532 protein–RNA pairs in 13,5 ms