Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Vsx1Q91V10 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vsx1Q91V10 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Vsx1Q91V10 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vsx1Q91V10 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vsx1Q91V10 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vsx1Q91V10 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vsx1Q91V10 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vsx1Q91V10 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vsx1Q91V10 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vsx1Q91V10 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vsx1Q91V10 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Vsx1Q91V10 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vsx1Q91V10 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vsx1Q91V10 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vsx1Q91V10 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.8■■□□□ 1.4
Vsx1Q91V10 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vsx1Q91V10 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vsx1Q91V10 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Vsx1Q91V10 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vsx1Q91V10 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Vsx1Q91V10 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vsx1Q91V10 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vsx1Q91V10 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.77■■□□□ 1.4
Vsx1Q91V10 Gm12366-201ENSMUST00000121722 873 ntBASIC23.77■■□□□ 1.4
Vsx1Q91V10 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.77■■□□□ 1.4
Vsx1Q91V10 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vsx1Q91V10 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.77■■□□□ 1.4
Vsx1Q91V10 Gm5786-201ENSMUST00000085368 882 ntBASIC23.77■■□□□ 1.4
Vsx1Q91V10 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vsx1Q91V10 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vsx1Q91V10 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vsx1Q91V10 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vsx1Q91V10 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vsx1Q91V10 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vsx1Q91V10 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vsx1Q91V10 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vsx1Q91V10 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vsx1Q91V10 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vsx1Q91V10 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Vsx1Q91V10 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Vsx1Q91V10 Scarna2-201ENSMUST00000157560 414 ntBASIC23.74■■□□□ 1.39
Vsx1Q91V10 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vsx1Q91V10 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vsx1Q91V10 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vsx1Q91V10 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.73■■□□□ 1.39
Vsx1Q91V10 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vsx1Q91V10 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vsx1Q91V10 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
Vsx1Q91V10 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.7■■□□□ 1.38
Vsx1Q91V10 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vsx1Q91V10 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Vsx1Q91V10 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Vsx1Q91V10 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.68■■□□□ 1.38
Vsx1Q91V10 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.68■■□□□ 1.38
Vsx1Q91V10 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vsx1Q91V10 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Vsx1Q91V10 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.67■■□□□ 1.38
Vsx1Q91V10 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Vsx1Q91V10 Gm4799-201ENSMUST00000095396 657 ntBASIC23.67■■□□□ 1.38
Vsx1Q91V10 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vsx1Q91V10 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Vsx1Q91V10 Particl-201ENSMUST00000205370 1560 ntBASIC23.66■■□□□ 1.38
Vsx1Q91V10 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vsx1Q91V10 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.66■■□□□ 1.38
Vsx1Q91V10 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vsx1Q91V10 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vsx1Q91V10 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vsx1Q91V10 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vsx1Q91V10 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Vsx1Q91V10 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vsx1Q91V10 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vsx1Q91V10 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vsx1Q91V10 Gm11687-201ENSMUST00000118911 886 ntBASIC23.64■■□□□ 1.37
Vsx1Q91V10 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Vsx1Q91V10 Gm15039-201ENSMUST00000118914 875 ntBASIC23.63■■□□□ 1.37
Vsx1Q91V10 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vsx1Q91V10 Gm9806-201ENSMUST00000051080 552 ntBASIC23.63■■□□□ 1.37
Vsx1Q91V10 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.63■■□□□ 1.37
Vsx1Q91V10 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Vsx1Q91V10 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vsx1Q91V10 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Vsx1Q91V10 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vsx1Q91V10 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Vsx1Q91V10 Gm30023-201ENSMUST00000197970 889 ntBASIC23.61■■□□□ 1.37
Vsx1Q91V10 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Vsx1Q91V10 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vsx1Q91V10 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vsx1Q91V10 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Vsx1Q91V10 Gm16437-201ENSMUST00000025669 507 ntBASIC23.6■■□□□ 1.37
Vsx1Q91V10 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.6■■□□□ 1.37
Vsx1Q91V10 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vsx1Q91V10 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vsx1Q91V10 Zxda-201ENSMUST00000117281 2621 ntBASIC23.58■■□□□ 1.37
Vsx1Q91V10 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Vsx1Q91V10 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
Vsx1Q91V10 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Vsx1Q91V10 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Vsx1Q91V10 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Vsx1Q91V10 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms