Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
TraipQ8VIG6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
TraipQ8VIG6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TraipQ8VIG6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TraipQ8VIG6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TraipQ8VIG6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TraipQ8VIG6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TraipQ8VIG6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TraipQ8VIG6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
TraipQ8VIG6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.9■■□□□ 1.74
TraipQ8VIG6 Zxda-201ENSMUST00000117281 2621 ntBASIC25.89■■□□□ 1.73
TraipQ8VIG6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TraipQ8VIG6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
TraipQ8VIG6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TraipQ8VIG6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TraipQ8VIG6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TraipQ8VIG6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TraipQ8VIG6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.86■■□□□ 1.73
TraipQ8VIG6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TraipQ8VIG6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TraipQ8VIG6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.85■■□□□ 1.73
TraipQ8VIG6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TraipQ8VIG6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TraipQ8VIG6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.82■■□□□ 1.72
TraipQ8VIG6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
TraipQ8VIG6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TraipQ8VIG6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TraipQ8VIG6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.8■■□□□ 1.72
TraipQ8VIG6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TraipQ8VIG6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.79■■□□□ 1.72
TraipQ8VIG6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
TraipQ8VIG6 Particl-201ENSMUST00000205370 1560 ntBASIC25.78■■□□□ 1.72
TraipQ8VIG6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.76■■□□□ 1.71
TraipQ8VIG6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TraipQ8VIG6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TraipQ8VIG6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TraipQ8VIG6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
TraipQ8VIG6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TraipQ8VIG6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TraipQ8VIG6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
TraipQ8VIG6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
TraipQ8VIG6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TraipQ8VIG6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TraipQ8VIG6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.7■■□□□ 1.7
TraipQ8VIG6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TraipQ8VIG6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
TraipQ8VIG6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.69■■□□□ 1.7
TraipQ8VIG6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.69■■□□□ 1.7
TraipQ8VIG6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TraipQ8VIG6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.68■■□□□ 1.7
TraipQ8VIG6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TraipQ8VIG6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TraipQ8VIG6 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.65■■□□□ 1.7
TraipQ8VIG6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TraipQ8VIG6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.65■■□□□ 1.7
TraipQ8VIG6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TraipQ8VIG6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TraipQ8VIG6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
TraipQ8VIG6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TraipQ8VIG6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TraipQ8VIG6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TraipQ8VIG6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
TraipQ8VIG6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.61■■□□□ 1.69
TraipQ8VIG6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TraipQ8VIG6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.6■■□□□ 1.69
TraipQ8VIG6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.6■■□□□ 1.69
TraipQ8VIG6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TraipQ8VIG6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TraipQ8VIG6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
TraipQ8VIG6 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.58■■□□□ 1.69
TraipQ8VIG6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TraipQ8VIG6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TraipQ8VIG6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TraipQ8VIG6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TraipQ8VIG6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.56■■□□□ 1.68
TraipQ8VIG6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.55■■□□□ 1.68
TraipQ8VIG6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TraipQ8VIG6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.54■■□□□ 1.68
TraipQ8VIG6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
TraipQ8VIG6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TraipQ8VIG6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TraipQ8VIG6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
TraipQ8VIG6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.52■■□□□ 1.68
TraipQ8VIG6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TraipQ8VIG6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
TraipQ8VIG6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TraipQ8VIG6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.52■■□□□ 1.68
TraipQ8VIG6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.5■■□□□ 1.67
TraipQ8VIG6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
TraipQ8VIG6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
TraipQ8VIG6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
TraipQ8VIG6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
TraipQ8VIG6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TraipQ8VIG6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TraipQ8VIG6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
TraipQ8VIG6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TraipQ8VIG6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TraipQ8VIG6 Gm37136-201ENSMUST00000194368 194 ntBASIC25.47■■□□□ 1.67
TraipQ8VIG6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TraipQ8VIG6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms