Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim60Q8VI40 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Trim60Q8VI40 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.65■■□□□ 1.54
Trim60Q8VI40 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Trim60Q8VI40 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim60Q8VI40 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim60Q8VI40 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Trim60Q8VI40 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.63■■□□□ 1.53
Trim60Q8VI40 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Trim60Q8VI40 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim60Q8VI40 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.62■■□□□ 1.53
Trim60Q8VI40 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.61■■□□□ 1.53
Trim60Q8VI40 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trim60Q8VI40 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trim60Q8VI40 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim60Q8VI40 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
Trim60Q8VI40 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Trim60Q8VI40 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Trim60Q8VI40 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim60Q8VI40 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.56■■□□□ 1.52
Trim60Q8VI40 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim60Q8VI40 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim60Q8VI40 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Trim60Q8VI40 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim60Q8VI40 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Trim60Q8VI40 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.54■■□□□ 1.52
Trim60Q8VI40 Zfp131-205ENSMUST00000223812 663 ntBASIC24.54■■□□□ 1.52
Trim60Q8VI40 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim60Q8VI40 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.53■■□□□ 1.52
Trim60Q8VI40 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
Trim60Q8VI40 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trim60Q8VI40 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.52■■□□□ 1.52
Trim60Q8VI40 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim60Q8VI40 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim60Q8VI40 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.51■■□□□ 1.51
Trim60Q8VI40 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Trim60Q8VI40 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.5■■□□□ 1.51
Trim60Q8VI40 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
Trim60Q8VI40 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim60Q8VI40 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim60Q8VI40 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim60Q8VI40 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
Trim60Q8VI40 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim60Q8VI40 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim60Q8VI40 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Trim60Q8VI40 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Trim60Q8VI40 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim60Q8VI40 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.42■■□□□ 1.5
Trim60Q8VI40 Gm24970-201ENSMUST00000175582 82 ntBASIC24.41■■□□□ 1.5
Trim60Q8VI40 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.41■■□□□ 1.5
Trim60Q8VI40 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.4■■□□□ 1.5
Trim60Q8VI40 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim60Q8VI40 Gm9397-201ENSMUST00000200125 605 ntBASIC24.39■■□□□ 1.49
Trim60Q8VI40 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.39■■□□□ 1.49
Trim60Q8VI40 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.38■■□□□ 1.49
Trim60Q8VI40 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Trim60Q8VI40 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim60Q8VI40 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim60Q8VI40 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.35■■□□□ 1.49
Trim60Q8VI40 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim60Q8VI40 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim60Q8VI40 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.34■■□□□ 1.49
Trim60Q8VI40 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim60Q8VI40 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim60Q8VI40 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim60Q8VI40 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim60Q8VI40 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim60Q8VI40 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Trim60Q8VI40 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim60Q8VI40 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim60Q8VI40 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim60Q8VI40 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Trim60Q8VI40 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim60Q8VI40 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms