Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim60Q8VI40 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Trim60Q8VI40 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.65■■□□□ 1.54
Trim60Q8VI40 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Trim60Q8VI40 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim60Q8VI40 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim60Q8VI40 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Trim60Q8VI40 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.63■■□□□ 1.53
Trim60Q8VI40 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Trim60Q8VI40 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim60Q8VI40 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.62■■□□□ 1.53
Trim60Q8VI40 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.61■■□□□ 1.53
Trim60Q8VI40 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim60Q8VI40 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim60Q8VI40 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim60Q8VI40 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trim60Q8VI40 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trim60Q8VI40 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim60Q8VI40 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
Trim60Q8VI40 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Trim60Q8VI40 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Trim60Q8VI40 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim60Q8VI40 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.56■■□□□ 1.52
Trim60Q8VI40 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim60Q8VI40 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim60Q8VI40 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Trim60Q8VI40 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim60Q8VI40 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Trim60Q8VI40 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.54■■□□□ 1.52
Trim60Q8VI40 Zfp131-205ENSMUST00000223812 663 ntBASIC24.54■■□□□ 1.52
Trim60Q8VI40 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim60Q8VI40 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.53■■□□□ 1.52
Trim60Q8VI40 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
Trim60Q8VI40 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trim60Q8VI40 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.52■■□□□ 1.52
Trim60Q8VI40 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim60Q8VI40 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim60Q8VI40 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.51■■□□□ 1.51
Trim60Q8VI40 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Trim60Q8VI40 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.5■■□□□ 1.51
Trim60Q8VI40 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim60Q8VI40 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
Trim60Q8VI40 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim60Q8VI40 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim60Q8VI40 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim60Q8VI40 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
Trim60Q8VI40 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim60Q8VI40 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim60Q8VI40 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Trim60Q8VI40 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Trim60Q8VI40 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim60Q8VI40 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.42■■□□□ 1.5
Trim60Q8VI40 Gm24970-201ENSMUST00000175582 82 ntBASIC24.41■■□□□ 1.5
Trim60Q8VI40 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.41■■□□□ 1.5
Trim60Q8VI40 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.4■■□□□ 1.5
Trim60Q8VI40 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim60Q8VI40 Gm9397-201ENSMUST00000200125 605 ntBASIC24.39■■□□□ 1.49
Trim60Q8VI40 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.39■■□□□ 1.49
Trim60Q8VI40 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.38■■□□□ 1.49
Trim60Q8VI40 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim60Q8VI40 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Trim60Q8VI40 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim60Q8VI40 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim60Q8VI40 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.35■■□□□ 1.49
Trim60Q8VI40 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim60Q8VI40 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim60Q8VI40 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.34■■□□□ 1.49
Trim60Q8VI40 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim60Q8VI40 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim60Q8VI40 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim60Q8VI40 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim60Q8VI40 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim60Q8VI40 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Trim60Q8VI40 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim60Q8VI40 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim60Q8VI40 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim60Q8VI40 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Trim60Q8VI40 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim60Q8VI40 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms