Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Cdhr1Q8VHP6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cdhr1Q8VHP6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cdhr1Q8VHP6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cdhr1Q8VHP6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cdhr1Q8VHP6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Cdhr1Q8VHP6 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.49■■□□□ 1.35
Cdhr1Q8VHP6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cdhr1Q8VHP6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr1Q8VHP6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr1Q8VHP6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr1Q8VHP6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr1Q8VHP6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cdhr1Q8VHP6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Cdhr1Q8VHP6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr1Q8VHP6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr1Q8VHP6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr1Q8VHP6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr1Q8VHP6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cdhr1Q8VHP6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cdhr1Q8VHP6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.42■■□□□ 1.34
Cdhr1Q8VHP6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.41■■□□□ 1.34
Cdhr1Q8VHP6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Cdhr1Q8VHP6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cdhr1Q8VHP6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.39■■□□□ 1.33
Cdhr1Q8VHP6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.39■■□□□ 1.33
Cdhr1Q8VHP6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Cdhr1Q8VHP6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.38■■□□□ 1.33
Cdhr1Q8VHP6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cdhr1Q8VHP6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cdhr1Q8VHP6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdhr1Q8VHP6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cdhr1Q8VHP6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cdhr1Q8VHP6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.37■■□□□ 1.33
Cdhr1Q8VHP6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdhr1Q8VHP6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Cdhr1Q8VHP6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdhr1Q8VHP6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdhr1Q8VHP6 Particl-201ENSMUST00000205370 1560 ntBASIC23.33■■□□□ 1.33
Cdhr1Q8VHP6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cdhr1Q8VHP6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.32■■□□□ 1.32
Cdhr1Q8VHP6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdhr1Q8VHP6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdhr1Q8VHP6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdhr1Q8VHP6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cdhr1Q8VHP6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdhr1Q8VHP6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cdhr1Q8VHP6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.29■■□□□ 1.32
Cdhr1Q8VHP6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cdhr1Q8VHP6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cdhr1Q8VHP6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdhr1Q8VHP6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdhr1Q8VHP6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.23■■□□□ 1.31
Cdhr1Q8VHP6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdhr1Q8VHP6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdhr1Q8VHP6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Cdhr1Q8VHP6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cdhr1Q8VHP6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Cdhr1Q8VHP6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cdhr1Q8VHP6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdhr1Q8VHP6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cdhr1Q8VHP6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdhr1Q8VHP6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdhr1Q8VHP6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Gm11175-201ENSMUST00000116172 543 ntBASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Gm6311-201ENSMUST00000073790 878 ntBASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cdhr1Q8VHP6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdhr1Q8VHP6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdhr1Q8VHP6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
Cdhr1Q8VHP6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdhr1Q8VHP6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Cdhr1Q8VHP6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cdhr1Q8VHP6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdhr1Q8VHP6 Mir6538-201ENSMUST00000183713 110 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms