Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.3■■□□□ 1.32
Rpusd1Q8VCZ8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.3■■□□□ 1.32
Rpusd1Q8VCZ8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpusd1Q8VCZ8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 Gm30023-201ENSMUST00000197970 889 ntBASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpusd1Q8VCZ8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Rpusd1Q8VCZ8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rpusd1Q8VCZ8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpusd1Q8VCZ8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpusd1Q8VCZ8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpusd1Q8VCZ8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rpusd1Q8VCZ8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpusd1Q8VCZ8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.25■■□□□ 1.31
Rpusd1Q8VCZ8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpusd1Q8VCZ8 Zxda-201ENSMUST00000117281 2621 ntBASIC23.25■■□□□ 1.31
Rpusd1Q8VCZ8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpusd1Q8VCZ8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpusd1Q8VCZ8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.23■■□□□ 1.31
Rpusd1Q8VCZ8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpusd1Q8VCZ8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpusd1Q8VCZ8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.22■■□□□ 1.31
Rpusd1Q8VCZ8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpusd1Q8VCZ8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.21■■□□□ 1.31
Rpusd1Q8VCZ8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpusd1Q8VCZ8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Rpusd1Q8VCZ8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rpusd1Q8VCZ8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpusd1Q8VCZ8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpusd1Q8VCZ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpusd1Q8VCZ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Rpusd1Q8VCZ8 Particl-201ENSMUST00000205370 1560 ntBASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rpusd1Q8VCZ8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.14■■□□□ 1.29
Rpusd1Q8VCZ8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.14■■□□□ 1.29
Rpusd1Q8VCZ8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpusd1Q8VCZ8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rpusd1Q8VCZ8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Rpusd1Q8VCZ8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.13■■□□□ 1.29
Rpusd1Q8VCZ8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpusd1Q8VCZ8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpusd1Q8VCZ8 Gm11175-201ENSMUST00000116172 543 ntBASIC23.1■■□□□ 1.29
Rpusd1Q8VCZ8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpusd1Q8VCZ8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Rpusd1Q8VCZ8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpusd1Q8VCZ8 Mir6538-201ENSMUST00000183713 110 ntBASIC23.09■■□□□ 1.29
Rpusd1Q8VCZ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.09■■□□□ 1.29
Rpusd1Q8VCZ8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpusd1Q8VCZ8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
Rpusd1Q8VCZ8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rpusd1Q8VCZ8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.06■■□□□ 1.28
Rpusd1Q8VCZ8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpusd1Q8VCZ8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rpusd1Q8VCZ8 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.05■■□□□ 1.28
Rpusd1Q8VCZ8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpusd1Q8VCZ8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpusd1Q8VCZ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpusd1Q8VCZ8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Rpusd1Q8VCZ8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpusd1Q8VCZ8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpusd1Q8VCZ8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Rpusd1Q8VCZ8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpusd1Q8VCZ8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rpusd1Q8VCZ8 Gm6311-201ENSMUST00000073790 878 ntBASIC23.02■■□□□ 1.28
Rpusd1Q8VCZ8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Rpusd1Q8VCZ8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpusd1Q8VCZ8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Rpusd1Q8VCZ8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpusd1Q8VCZ8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpusd1Q8VCZ8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Rpusd1Q8VCZ8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpusd1Q8VCZ8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.99■■□□□ 1.27
Rpusd1Q8VCZ8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpusd1Q8VCZ8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpusd1Q8VCZ8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.98■■□□□ 1.27
Rpusd1Q8VCZ8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Rpusd1Q8VCZ8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpusd1Q8VCZ8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Rpusd1Q8VCZ8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.95■■□□□ 1.26
Rpusd1Q8VCZ8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpusd1Q8VCZ8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpusd1Q8VCZ8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpusd1Q8VCZ8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rpusd1Q8VCZ8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.92■■□□□ 1.26
Rpusd1Q8VCZ8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rpusd1Q8VCZ8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.91■■□□□ 1.26
Rpusd1Q8VCZ8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Rpusd1Q8VCZ8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms