Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.3■■□□□ 1.32
Rpusd1Q8VCZ8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.3■■□□□ 1.32
Rpusd1Q8VCZ8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpusd1Q8VCZ8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 Gm30023-201ENSMUST00000197970 889 ntBASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpusd1Q8VCZ8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpusd1Q8VCZ8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Rpusd1Q8VCZ8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rpusd1Q8VCZ8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpusd1Q8VCZ8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpusd1Q8VCZ8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpusd1Q8VCZ8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rpusd1Q8VCZ8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpusd1Q8VCZ8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.25■■□□□ 1.31
Rpusd1Q8VCZ8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpusd1Q8VCZ8 Zxda-201ENSMUST00000117281 2621 ntBASIC23.25■■□□□ 1.31
Rpusd1Q8VCZ8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpusd1Q8VCZ8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpusd1Q8VCZ8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.23■■□□□ 1.31
Rpusd1Q8VCZ8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpusd1Q8VCZ8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpusd1Q8VCZ8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.22■■□□□ 1.31
Rpusd1Q8VCZ8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpusd1Q8VCZ8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.21■■□□□ 1.31
Rpusd1Q8VCZ8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpusd1Q8VCZ8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Rpusd1Q8VCZ8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rpusd1Q8VCZ8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpusd1Q8VCZ8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpusd1Q8VCZ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpusd1Q8VCZ8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpusd1Q8VCZ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Rpusd1Q8VCZ8 Particl-201ENSMUST00000205370 1560 ntBASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpusd1Q8VCZ8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rpusd1Q8VCZ8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.14■■□□□ 1.29
Rpusd1Q8VCZ8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.14■■□□□ 1.29
Rpusd1Q8VCZ8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpusd1Q8VCZ8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rpusd1Q8VCZ8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Rpusd1Q8VCZ8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.13■■□□□ 1.29
Rpusd1Q8VCZ8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpusd1Q8VCZ8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpusd1Q8VCZ8 Gm11175-201ENSMUST00000116172 543 ntBASIC23.1■■□□□ 1.29
Rpusd1Q8VCZ8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpusd1Q8VCZ8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Rpusd1Q8VCZ8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpusd1Q8VCZ8 Mir6538-201ENSMUST00000183713 110 ntBASIC23.09■■□□□ 1.29
Rpusd1Q8VCZ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.09■■□□□ 1.29
Rpusd1Q8VCZ8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpusd1Q8VCZ8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
Rpusd1Q8VCZ8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rpusd1Q8VCZ8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.06■■□□□ 1.28
Rpusd1Q8VCZ8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpusd1Q8VCZ8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rpusd1Q8VCZ8 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.05■■□□□ 1.28
Rpusd1Q8VCZ8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpusd1Q8VCZ8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpusd1Q8VCZ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpusd1Q8VCZ8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Rpusd1Q8VCZ8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpusd1Q8VCZ8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpusd1Q8VCZ8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Rpusd1Q8VCZ8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpusd1Q8VCZ8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rpusd1Q8VCZ8 Gm6311-201ENSMUST00000073790 878 ntBASIC23.02■■□□□ 1.28
Rpusd1Q8VCZ8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Rpusd1Q8VCZ8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpusd1Q8VCZ8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Rpusd1Q8VCZ8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpusd1Q8VCZ8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpusd1Q8VCZ8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Rpusd1Q8VCZ8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpusd1Q8VCZ8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.99■■□□□ 1.27
Rpusd1Q8VCZ8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpusd1Q8VCZ8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpusd1Q8VCZ8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.98■■□□□ 1.27
Rpusd1Q8VCZ8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Rpusd1Q8VCZ8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpusd1Q8VCZ8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Rpusd1Q8VCZ8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.95■■□□□ 1.26
Rpusd1Q8VCZ8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpusd1Q8VCZ8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpusd1Q8VCZ8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpusd1Q8VCZ8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rpusd1Q8VCZ8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.92■■□□□ 1.26
Rpusd1Q8VCZ8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rpusd1Q8VCZ8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.91■■□□□ 1.26
Rpusd1Q8VCZ8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Rpusd1Q8VCZ8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms