Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vps39Q8R5L3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Vps39Q8R5L3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.83■■□□□ 1.41
Vps39Q8R5L3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vps39Q8R5L3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vps39Q8R5L3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps39Q8R5L3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.81■■□□□ 1.4
Vps39Q8R5L3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.81■■□□□ 1.4
Vps39Q8R5L3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps39Q8R5L3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps39Q8R5L3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps39Q8R5L3 Gm45855-201ENSMUST00000212546 880 ntBASIC23.8■■□□□ 1.4
Vps39Q8R5L3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.8■■□□□ 1.4
Vps39Q8R5L3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Vps39Q8R5L3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.8■■□□□ 1.4
Vps39Q8R5L3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Vps39Q8R5L3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.79■■□□□ 1.4
Vps39Q8R5L3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Vps39Q8R5L3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps39Q8R5L3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Vps39Q8R5L3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vps39Q8R5L3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Vps39Q8R5L3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Vps39Q8R5L3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vps39Q8R5L3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vps39Q8R5L3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.77■■□□□ 1.4
Vps39Q8R5L3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Vps39Q8R5L3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vps39Q8R5L3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vps39Q8R5L3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vps39Q8R5L3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Vps39Q8R5L3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vps39Q8R5L3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Vps39Q8R5L3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Vps39Q8R5L3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vps39Q8R5L3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Vps39Q8R5L3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vps39Q8R5L3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Vps39Q8R5L3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vps39Q8R5L3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vps39Q8R5L3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps39Q8R5L3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Vps39Q8R5L3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vps39Q8R5L3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Vps39Q8R5L3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.68■■□□□ 1.38
Vps39Q8R5L3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vps39Q8R5L3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Vps39Q8R5L3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vps39Q8R5L3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps39Q8R5L3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps39Q8R5L3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vps39Q8R5L3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vps39Q8R5L3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vps39Q8R5L3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vps39Q8R5L3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vps39Q8R5L3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vps39Q8R5L3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vps39Q8R5L3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Vps39Q8R5L3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vps39Q8R5L3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Vps39Q8R5L3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Vps39Q8R5L3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Vps39Q8R5L3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.63■■□□□ 1.37
Vps39Q8R5L3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
Vps39Q8R5L3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.63■■□□□ 1.37
Vps39Q8R5L3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vps39Q8R5L3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
Vps39Q8R5L3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Vps39Q8R5L3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Vps39Q8R5L3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.61■■□□□ 1.37
Vps39Q8R5L3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
Vps39Q8R5L3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vps39Q8R5L3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Vps39Q8R5L3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Vps39Q8R5L3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps39Q8R5L3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps39Q8R5L3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps39Q8R5L3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps39Q8R5L3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps39Q8R5L3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Vps39Q8R5L3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.57■■□□□ 1.36
Vps39Q8R5L3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps39Q8R5L3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
Vps39Q8R5L3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps39Q8R5L3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Vps39Q8R5L3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps39Q8R5L3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps39Q8R5L3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vps39Q8R5L3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.56■■□□□ 1.36
Vps39Q8R5L3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Vps39Q8R5L3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vps39Q8R5L3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
Vps39Q8R5L3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Vps39Q8R5L3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vps39Q8R5L3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
Vps39Q8R5L3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vps39Q8R5L3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Vps39Q8R5L3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vps39Q8R5L3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Vps39Q8R5L3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms