Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.74■■■□□ 2.19
Top1mtQ8R4U6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Top1mtQ8R4U6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Top1mtQ8R4U6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
Top1mtQ8R4U6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Top1mtQ8R4U6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Top1mtQ8R4U6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Top1mtQ8R4U6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Top1mtQ8R4U6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Top1mtQ8R4U6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
Top1mtQ8R4U6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Top1mtQ8R4U6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
Top1mtQ8R4U6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Top1mtQ8R4U6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Top1mtQ8R4U6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.66■■■□□ 2.18
Top1mtQ8R4U6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.65■■■□□ 2.18
Top1mtQ8R4U6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Top1mtQ8R4U6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Top1mtQ8R4U6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Top1mtQ8R4U6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Top1mtQ8R4U6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Top1mtQ8R4U6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Top1mtQ8R4U6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.61■■■□□ 2.17
Top1mtQ8R4U6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Top1mtQ8R4U6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
Top1mtQ8R4U6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Top1mtQ8R4U6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Top1mtQ8R4U6 Gm30023-201ENSMUST00000197970 889 ntBASIC28.58■■■□□ 2.17
Top1mtQ8R4U6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Top1mtQ8R4U6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.58■■■□□ 2.16
Top1mtQ8R4U6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Top1mtQ8R4U6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Top1mtQ8R4U6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Top1mtQ8R4U6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Top1mtQ8R4U6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Top1mtQ8R4U6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Top1mtQ8R4U6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.51■■■□□ 2.15
Top1mtQ8R4U6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Top1mtQ8R4U6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Top1mtQ8R4U6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Top1mtQ8R4U6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.5■■■□□ 2.15
Top1mtQ8R4U6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Top1mtQ8R4U6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Top1mtQ8R4U6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.44■■■□□ 2.14
Top1mtQ8R4U6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Top1mtQ8R4U6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Top1mtQ8R4U6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Top1mtQ8R4U6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Top1mtQ8R4U6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.43■■■□□ 2.14
Top1mtQ8R4U6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Top1mtQ8R4U6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Top1mtQ8R4U6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Top1mtQ8R4U6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Top1mtQ8R4U6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Top1mtQ8R4U6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Top1mtQ8R4U6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
Top1mtQ8R4U6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Top1mtQ8R4U6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.38■■■□□ 2.13
Top1mtQ8R4U6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.38■■■□□ 2.13
Top1mtQ8R4U6 Nkain2-201ENSMUST00000092602 558 ntBASIC28.37■■■□□ 2.13
Top1mtQ8R4U6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Top1mtQ8R4U6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Top1mtQ8R4U6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Top1mtQ8R4U6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Top1mtQ8R4U6 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.36■■■□□ 2.13
Top1mtQ8R4U6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms