Protein–RNA interactions for Protein: Q8R2K8

Uncharacterized protein C1orf54 homolog, mousemouse

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8R2K8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8R2K8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8R2K8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8R2K8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Q8R2K8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8R2K8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8R2K8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8R2K8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.56■□□□□ 0.88
Q8R2K8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8R2K8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8R2K8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Q8R2K8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.54■□□□□ 0.88
Q8R2K8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Q8R2K8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8R2K8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.53■□□□□ 0.88
Q8R2K8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8R2K8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q8R2K8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q8R2K8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Q8R2K8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Q8R2K8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Q8R2K8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8R2K8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8R2K8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8R2K8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Q8R2K8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Q8R2K8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q8R2K8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q8R2K8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q8R2K8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Q8R2K8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q8R2K8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Q8R2K8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Q8R2K8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Q8R2K8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q8R2K8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Q8R2K8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.47■□□□□ 0.87
Q8R2K8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.46■□□□□ 0.87
Q8R2K8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Q8R2K8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8R2K8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8R2K8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8R2K8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Q8R2K8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q8R2K8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q8R2K8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Q8R2K8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Q8R2K8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Q8R2K8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Q8R2K8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.44■□□□□ 0.86
Q8R2K8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8R2K8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.44■□□□□ 0.86
Q8R2K8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8R2K8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8R2K8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8R2K8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.42■□□□□ 0.86
Q8R2K8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Q8R2K8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Q8R2K8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8R2K8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8R2K8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8R2K8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8R2K8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Q8R2K8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q8R2K8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8R2K8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8R2K8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8R2K8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q8R2K8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8R2K8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8R2K8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Q8R2K8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Q8R2K8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q8R2K8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Q8R2K8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Q8R2K8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Q8R2K8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8R2K8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8R2K8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8R2K8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.37■□□□□ 0.85
Q8R2K8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8R2K8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Q8R2K8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8R2K8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Q8R2K8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8R2K8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Q8R2K8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Q8R2K8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q8R2K8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Q8R2K8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8R2K8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8R2K8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q8R2K8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q8R2K8 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.33■□□□□ 0.85
Q8R2K8 Gm27322-201ENSMUST00000184007 104 ntBASIC20.33■□□□□ 0.85
Q8R2K8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q8R2K8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8R2K8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8R2K8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8R2K8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms