Protein–RNA interactions for Protein: Q8R0S4

Cacnb4, Voltage-dependent L-type calcium channel subunit beta-4, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb4Q8R0S4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacnb4Q8R0S4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cacnb4Q8R0S4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cacnb4Q8R0S4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacnb4Q8R0S4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.28■■□□□ 1
Cacnb4Q8R0S4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cacnb4Q8R0S4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Cacnb4Q8R0S4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cacnb4Q8R0S4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb4Q8R0S4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb4Q8R0S4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cacnb4Q8R0S4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.27■■□□□ 1
Cacnb4Q8R0S4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb4Q8R0S4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb4Q8R0S4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cacnb4Q8R0S4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacnb4Q8R0S4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb4Q8R0S4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb4Q8R0S4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb4Q8R0S4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb4Q8R0S4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb4Q8R0S4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb4Q8R0S4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb4Q8R0S4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb4Q8R0S4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacnb4Q8R0S4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Cacnb4Q8R0S4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cacnb4Q8R0S4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Cacnb4Q8R0S4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cacnb4Q8R0S4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.2■□□□□ 0.98
Cacnb4Q8R0S4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacnb4Q8R0S4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.2■□□□□ 0.98
Cacnb4Q8R0S4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacnb4Q8R0S4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacnb4Q8R0S4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacnb4Q8R0S4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.18■□□□□ 0.98
Cacnb4Q8R0S4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacnb4Q8R0S4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cacnb4Q8R0S4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacnb4Q8R0S4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cacnb4Q8R0S4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacnb4Q8R0S4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacnb4Q8R0S4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Cacnb4Q8R0S4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacnb4Q8R0S4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Cacnb4Q8R0S4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cacnb4Q8R0S4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb4Q8R0S4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb4Q8R0S4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb4Q8R0S4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cacnb4Q8R0S4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb4Q8R0S4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb4Q8R0S4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb4Q8R0S4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb4Q8R0S4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb4Q8R0S4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb4Q8R0S4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb4Q8R0S4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacnb4Q8R0S4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacnb4Q8R0S4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cacnb4Q8R0S4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cacnb4Q8R0S4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacnb4Q8R0S4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacnb4Q8R0S4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacnb4Q8R0S4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cacnb4Q8R0S4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cacnb4Q8R0S4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb4Q8R0S4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb4Q8R0S4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb4Q8R0S4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb4Q8R0S4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb4Q8R0S4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacnb4Q8R0S4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacnb4Q8R0S4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacnb4Q8R0S4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacnb4Q8R0S4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacnb4Q8R0S4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacnb4Q8R0S4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacnb4Q8R0S4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.04■□□□□ 0.96
Cacnb4Q8R0S4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacnb4Q8R0S4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.04■□□□□ 0.96
Cacnb4Q8R0S4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacnb4Q8R0S4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cacnb4Q8R0S4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacnb4Q8R0S4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacnb4Q8R0S4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cacnb4Q8R0S4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacnb4Q8R0S4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Cacnb4Q8R0S4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacnb4Q8R0S4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacnb4Q8R0S4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacnb4Q8R0S4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cacnb4Q8R0S4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacnb4Q8R0S4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Cacnb4Q8R0S4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cacnb4Q8R0S4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacnb4Q8R0S4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cacnb4Q8R0S4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cacnb4Q8R0S4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacnb4Q8R0S4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms