Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Prpf31Q8CCF0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.41■■□□□ 1.82
Prpf31Q8CCF0 Gm30023-201ENSMUST00000197970 889 ntBASIC26.4■■□□□ 1.82
Prpf31Q8CCF0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Prpf31Q8CCF0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.39■■□□□ 1.82
Prpf31Q8CCF0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Prpf31Q8CCF0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.38■■□□□ 1.81
Prpf31Q8CCF0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.37■■□□□ 1.81
Prpf31Q8CCF0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Prpf31Q8CCF0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Prpf31Q8CCF0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.36■■□□□ 1.81
Prpf31Q8CCF0 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.36■■□□□ 1.81
Prpf31Q8CCF0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Prpf31Q8CCF0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Prpf31Q8CCF0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Prpf31Q8CCF0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.34■■□□□ 1.81
Prpf31Q8CCF0 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.34■■□□□ 1.81
Prpf31Q8CCF0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf31Q8CCF0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf31Q8CCF0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf31Q8CCF0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Prpf31Q8CCF0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
Prpf31Q8CCF0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Prpf31Q8CCF0 Gm7432-201ENSMUST00000210343 879 ntBASIC26.31■■□□□ 1.8
Prpf31Q8CCF0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf31Q8CCF0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf31Q8CCF0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Prpf31Q8CCF0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Prpf31Q8CCF0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Prpf31Q8CCF0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf31Q8CCF0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf31Q8CCF0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf31Q8CCF0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf31Q8CCF0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.27■■□□□ 1.8
Prpf31Q8CCF0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Prpf31Q8CCF0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Prpf31Q8CCF0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Prpf31Q8CCF0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Prpf31Q8CCF0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
Prpf31Q8CCF0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf31Q8CCF0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf31Q8CCF0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.24■■□□□ 1.79
Prpf31Q8CCF0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Prpf31Q8CCF0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Prpf31Q8CCF0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Prpf31Q8CCF0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.21■■□□□ 1.79
Prpf31Q8CCF0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Prpf31Q8CCF0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Prpf31Q8CCF0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Prpf31Q8CCF0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Prpf31Q8CCF0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.18■■□□□ 1.78
Prpf31Q8CCF0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.18■■□□□ 1.78
Prpf31Q8CCF0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.18■■□□□ 1.78
Prpf31Q8CCF0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Prpf31Q8CCF0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Prpf31Q8CCF0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf31Q8CCF0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf31Q8CCF0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf31Q8CCF0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf31Q8CCF0 Gm11599-201ENSMUST00000118720 878 ntBASIC26.16■■□□□ 1.78
Prpf31Q8CCF0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf31Q8CCF0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf31Q8CCF0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Prpf31Q8CCF0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.14■■□□□ 1.78
Prpf31Q8CCF0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Prpf31Q8CCF0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Prpf31Q8CCF0 Amer2-203ENSMUST00000225247 2662 ntBASIC26.12■■□□□ 1.77
Prpf31Q8CCF0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Prpf31Q8CCF0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf31Q8CCF0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf31Q8CCF0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.1■■□□□ 1.77
Prpf31Q8CCF0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf31Q8CCF0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf31Q8CCF0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.1■■□□□ 1.77
Prpf31Q8CCF0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Prpf31Q8CCF0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Prpf31Q8CCF0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
Prpf31Q8CCF0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Prpf31Q8CCF0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Prpf31Q8CCF0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Prpf31Q8CCF0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.05■■□□□ 1.76
Prpf31Q8CCF0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Prpf31Q8CCF0 Particl-201ENSMUST00000205370 1560 ntBASIC26.03■■□□□ 1.76
Prpf31Q8CCF0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Prpf31Q8CCF0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
Prpf31Q8CCF0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf31Q8CCF0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf31Q8CCF0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf31Q8CCF0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
Prpf31Q8CCF0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Prpf31Q8CCF0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26■■□□□ 1.75
Prpf31Q8CCF0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Prpf31Q8CCF0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.99■■□□□ 1.75
Prpf31Q8CCF0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Prpf31Q8CCF0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.99■■□□□ 1.75
Prpf31Q8CCF0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Prpf31Q8CCF0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Prpf31Q8CCF0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Prpf31Q8CCF0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Prpf31Q8CCF0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms