Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ptpn7Q8BUM3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptpn7Q8BUM3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptpn7Q8BUM3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptpn7Q8BUM3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ptpn7Q8BUM3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.17■■□□□ 1.14
Ptpn7Q8BUM3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Ptpn7Q8BUM3 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.17■■□□□ 1.14
Ptpn7Q8BUM3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Ptpn7Q8BUM3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Ptpn7Q8BUM3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptpn7Q8BUM3 Zfp131-205ENSMUST00000223812 663 ntBASIC22.14■■□□□ 1.13
Ptpn7Q8BUM3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptpn7Q8BUM3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Ptpn7Q8BUM3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.13■■□□□ 1.13
Ptpn7Q8BUM3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Ptpn7Q8BUM3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptpn7Q8BUM3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ptpn7Q8BUM3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptpn7Q8BUM3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.11■■□□□ 1.13
Ptpn7Q8BUM3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptpn7Q8BUM3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ptpn7Q8BUM3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptpn7Q8BUM3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Ptpn7Q8BUM3 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.1■■□□□ 1.13
Ptpn7Q8BUM3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ptpn7Q8BUM3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ptpn7Q8BUM3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ptpn7Q8BUM3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptpn7Q8BUM3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Ptpn7Q8BUM3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptpn7Q8BUM3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptpn7Q8BUM3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ptpn7Q8BUM3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ptpn7Q8BUM3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.08■■□□□ 1.13
Ptpn7Q8BUM3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
Ptpn7Q8BUM3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ptpn7Q8BUM3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptpn7Q8BUM3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptpn7Q8BUM3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptpn7Q8BUM3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ptpn7Q8BUM3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
Ptpn7Q8BUM3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ptpn7Q8BUM3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptpn7Q8BUM3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.06■■□□□ 1.12
Ptpn7Q8BUM3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptpn7Q8BUM3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptpn7Q8BUM3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.05■■□□□ 1.12
Ptpn7Q8BUM3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Ptpn7Q8BUM3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Ptpn7Q8BUM3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptpn7Q8BUM3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptpn7Q8BUM3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptpn7Q8BUM3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptpn7Q8BUM3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptpn7Q8BUM3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.03■■□□□ 1.12
Ptpn7Q8BUM3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ptpn7Q8BUM3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.03■■□□□ 1.12
Ptpn7Q8BUM3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptpn7Q8BUM3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.02■■□□□ 1.12
Ptpn7Q8BUM3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.02■■□□□ 1.12
Ptpn7Q8BUM3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptpn7Q8BUM3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ptpn7Q8BUM3 Gm9397-201ENSMUST00000200125 605 ntBASIC22.01■■□□□ 1.11
Ptpn7Q8BUM3 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.01■■□□□ 1.11
Ptpn7Q8BUM3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptpn7Q8BUM3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptpn7Q8BUM3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
Ptpn7Q8BUM3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ptpn7Q8BUM3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ptpn7Q8BUM3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ptpn7Q8BUM3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Ptpn7Q8BUM3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptpn7Q8BUM3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.99■■□□□ 1.11
Ptpn7Q8BUM3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptpn7Q8BUM3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptpn7Q8BUM3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptpn7Q8BUM3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Ptpn7Q8BUM3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptpn7Q8BUM3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.98■■□□□ 1.11
Ptpn7Q8BUM3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptpn7Q8BUM3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptpn7Q8BUM3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptpn7Q8BUM3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
Ptpn7Q8BUM3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptpn7Q8BUM3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ptpn7Q8BUM3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Ptpn7Q8BUM3 Gm24970-201ENSMUST00000175582 82 ntBASIC21.97■■□□□ 1.11
Ptpn7Q8BUM3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptpn7Q8BUM3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Ptpn7Q8BUM3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.95■■□□□ 1.1
Ptpn7Q8BUM3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ptpn7Q8BUM3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.93■■□□□ 1.1
Ptpn7Q8BUM3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptpn7Q8BUM3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ptpn7Q8BUM3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptpn7Q8BUM3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptpn7Q8BUM3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptpn7Q8BUM3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptpn7Q8BUM3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms