Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf7Q8BTV2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf7Q8BTV2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Cpsf7Q8BTV2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf7Q8BTV2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf7Q8BTV2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf7Q8BTV2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Cpsf7Q8BTV2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf7Q8BTV2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf7Q8BTV2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf7Q8BTV2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.89■■□□□ 1.41
Cpsf7Q8BTV2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf7Q8BTV2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf7Q8BTV2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf7Q8BTV2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Cpsf7Q8BTV2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf7Q8BTV2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf7Q8BTV2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Cpsf7Q8BTV2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf7Q8BTV2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf7Q8BTV2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf7Q8BTV2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf7Q8BTV2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Zfp131-205ENSMUST00000223812 663 ntBASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Gm16148-201ENSMUST00000119653 893 ntBASIC23.83■■□□□ 1.41
Cpsf7Q8BTV2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cpsf7Q8BTV2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Cpsf7Q8BTV2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cpsf7Q8BTV2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf7Q8BTV2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf7Q8BTV2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf7Q8BTV2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf7Q8BTV2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf7Q8BTV2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf7Q8BTV2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf7Q8BTV2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf7Q8BTV2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf7Q8BTV2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf7Q8BTV2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf7Q8BTV2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf7Q8BTV2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Cpsf7Q8BTV2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cpsf7Q8BTV2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cpsf7Q8BTV2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cpsf7Q8BTV2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cpsf7Q8BTV2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cpsf7Q8BTV2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf7Q8BTV2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf7Q8BTV2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf7Q8BTV2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf7Q8BTV2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Cpsf7Q8BTV2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Cpsf7Q8BTV2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.69■■□□□ 1.38
Cpsf7Q8BTV2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf7Q8BTV2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf7Q8BTV2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf7Q8BTV2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf7Q8BTV2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cpsf7Q8BTV2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Cpsf7Q8BTV2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cpsf7Q8BTV2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.66■■□□□ 1.38
Cpsf7Q8BTV2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cpsf7Q8BTV2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cpsf7Q8BTV2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf7Q8BTV2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf7Q8BTV2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf7Q8BTV2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Cpsf7Q8BTV2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf7Q8BTV2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf7Q8BTV2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Cpsf7Q8BTV2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf7Q8BTV2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Cpsf7Q8BTV2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf7Q8BTV2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf7Q8BTV2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms