Protein–RNA interactions for Protein: Q8BLK3

Lsamp, Limbic system-associated membrane protein, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LsampQ8BLK3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LsampQ8BLK3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
LsampQ8BLK3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LsampQ8BLK3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LsampQ8BLK3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
LsampQ8BLK3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.47■■□□□ 1.03
LsampQ8BLK3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LsampQ8BLK3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.47■■□□□ 1.03
LsampQ8BLK3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LsampQ8BLK3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.46■■□□□ 1.03
LsampQ8BLK3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LsampQ8BLK3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LsampQ8BLK3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LsampQ8BLK3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.45■■□□□ 1.02
LsampQ8BLK3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LsampQ8BLK3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
LsampQ8BLK3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LsampQ8BLK3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LsampQ8BLK3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LsampQ8BLK3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LsampQ8BLK3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LsampQ8BLK3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LsampQ8BLK3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LsampQ8BLK3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LsampQ8BLK3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LsampQ8BLK3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LsampQ8BLK3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
LsampQ8BLK3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LsampQ8BLK3 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.42■■□□□ 1.02
LsampQ8BLK3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LsampQ8BLK3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LsampQ8BLK3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LsampQ8BLK3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LsampQ8BLK3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LsampQ8BLK3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
LsampQ8BLK3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
LsampQ8BLK3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LsampQ8BLK3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LsampQ8BLK3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LsampQ8BLK3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LsampQ8BLK3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LsampQ8BLK3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LsampQ8BLK3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LsampQ8BLK3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LsampQ8BLK3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.38■■□□□ 1.01
LsampQ8BLK3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LsampQ8BLK3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LsampQ8BLK3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LsampQ8BLK3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LsampQ8BLK3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LsampQ8BLK3 Gm16148-201ENSMUST00000119653 893 ntBASIC21.36■■□□□ 1.01
LsampQ8BLK3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LsampQ8BLK3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LsampQ8BLK3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LsampQ8BLK3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LsampQ8BLK3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LsampQ8BLK3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LsampQ8BLK3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.34■■□□□ 1.01
LsampQ8BLK3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LsampQ8BLK3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LsampQ8BLK3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LsampQ8BLK3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LsampQ8BLK3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LsampQ8BLK3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LsampQ8BLK3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LsampQ8BLK3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LsampQ8BLK3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LsampQ8BLK3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.32■■□□□ 1
LsampQ8BLK3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.32■■□□□ 1
LsampQ8BLK3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.31■■□□□ 1
LsampQ8BLK3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.31■■□□□ 1
LsampQ8BLK3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
LsampQ8BLK3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.29■■□□□ 1
LsampQ8BLK3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.29■■□□□ 1
LsampQ8BLK3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LsampQ8BLK3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.29■■□□□ 1
LsampQ8BLK3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LsampQ8BLK3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.29■■□□□ 1
LsampQ8BLK3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.28■■□□□ 1
LsampQ8BLK3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.28■■□□□ 1
LsampQ8BLK3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.28■■□□□ 1
LsampQ8BLK3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LsampQ8BLK3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.28■■□□□ 1
LsampQ8BLK3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.28■■□□□ 1
LsampQ8BLK3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LsampQ8BLK3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LsampQ8BLK3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LsampQ8BLK3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LsampQ8BLK3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LsampQ8BLK3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LsampQ8BLK3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LsampQ8BLK3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LsampQ8BLK3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LsampQ8BLK3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LsampQ8BLK3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.25■□□□□ 0.99
LsampQ8BLK3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LsampQ8BLK3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LsampQ8BLK3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LsampQ8BLK3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LsampQ8BLK3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms