Protein–RNA interactions for Protein: Q80XU8

Lrfn4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn4Q80XU8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrfn4Q80XU8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrfn4Q80XU8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrfn4Q80XU8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrfn4Q80XU8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Lrfn4Q80XU8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.21■□□□□ 0.99
Lrfn4Q80XU8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Lrfn4Q80XU8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrfn4Q80XU8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn4Q80XU8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn4Q80XU8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn4Q80XU8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrfn4Q80XU8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrfn4Q80XU8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrfn4Q80XU8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Lrfn4Q80XU8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrfn4Q80XU8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrfn4Q80XU8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrfn4Q80XU8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lrfn4Q80XU8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrfn4Q80XU8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrfn4Q80XU8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.14■□□□□ 0.97
Lrfn4Q80XU8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrfn4Q80XU8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.12■□□□□ 0.97
Lrfn4Q80XU8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrfn4Q80XU8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.11■□□□□ 0.97
Lrfn4Q80XU8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrfn4Q80XU8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Lrfn4Q80XU8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lrfn4Q80XU8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.1■□□□□ 0.97
Lrfn4Q80XU8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Lrfn4Q80XU8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lrfn4Q80XU8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.09■□□□□ 0.97
Lrfn4Q80XU8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrfn4Q80XU8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrfn4Q80XU8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lrfn4Q80XU8 Gm30023-201ENSMUST00000197970 889 ntBASIC21.08■□□□□ 0.97
Lrfn4Q80XU8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Lrfn4Q80XU8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lrfn4Q80XU8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrfn4Q80XU8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.07■□□□□ 0.96
Lrfn4Q80XU8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Lrfn4Q80XU8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrfn4Q80XU8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lrfn4Q80XU8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrfn4Q80XU8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Lrfn4Q80XU8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrfn4Q80XU8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lrfn4Q80XU8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrfn4Q80XU8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lrfn4Q80XU8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrfn4Q80XU8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Lrfn4Q80XU8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Lrfn4Q80XU8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lrfn4Q80XU8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrfn4Q80XU8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lrfn4Q80XU8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrfn4Q80XU8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrfn4Q80XU8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms