Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.42■■■□□ 2.14
Scn10aQ6QIY3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Scn10aQ6QIY3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Scn10aQ6QIY3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Scn10aQ6QIY3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scn10aQ6QIY3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scn10aQ6QIY3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scn10aQ6QIY3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Scn10aQ6QIY3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.39■■■□□ 2.13
Scn10aQ6QIY3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Scn10aQ6QIY3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Scn10aQ6QIY3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Scn10aQ6QIY3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.33■■■□□ 2.13
Scn10aQ6QIY3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Scn10aQ6QIY3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Scn10aQ6QIY3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Scn10aQ6QIY3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Scn10aQ6QIY3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Scn10aQ6QIY3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Scn10aQ6QIY3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.3■■■□□ 2.12
Scn10aQ6QIY3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Scn10aQ6QIY3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Scn10aQ6QIY3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
Scn10aQ6QIY3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scn10aQ6QIY3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scn10aQ6QIY3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scn10aQ6QIY3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Scn10aQ6QIY3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
Scn10aQ6QIY3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Scn10aQ6QIY3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Scn10aQ6QIY3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Scn10aQ6QIY3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Scn10aQ6QIY3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Scn10aQ6QIY3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Scn10aQ6QIY3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Scn10aQ6QIY3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Scn10aQ6QIY3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Scn10aQ6QIY3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Scn10aQ6QIY3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Scn10aQ6QIY3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Scn10aQ6QIY3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Scn10aQ6QIY3 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.2■■■□□ 2.1
Scn10aQ6QIY3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Scn10aQ6QIY3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.19■■■□□ 2.1
Scn10aQ6QIY3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Scn10aQ6QIY3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Scn10aQ6QIY3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Scn10aQ6QIY3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Scn10aQ6QIY3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.17■■■□□ 2.1
Scn10aQ6QIY3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Scn10aQ6QIY3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Scn10aQ6QIY3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Scn10aQ6QIY3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.15■■■□□ 2.1
Scn10aQ6QIY3 Gm12366-201ENSMUST00000121722 873 ntBASIC28.15■■■□□ 2.1
Scn10aQ6QIY3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.15■■■□□ 2.1
Scn10aQ6QIY3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Scn10aQ6QIY3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.15■■■□□ 2.1
Scn10aQ6QIY3 Gm5786-201ENSMUST00000085368 882 ntBASIC28.15■■■□□ 2.1
Scn10aQ6QIY3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.14■■■□□ 2.1
Scn10aQ6QIY3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Scn10aQ6QIY3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.13■■■□□ 2.09
Scn10aQ6QIY3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Scn10aQ6QIY3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Scn10aQ6QIY3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Scn10aQ6QIY3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Scn10aQ6QIY3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Scn10aQ6QIY3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Scn10aQ6QIY3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Scn10aQ6QIY3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Scn10aQ6QIY3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Scn10aQ6QIY3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Scn10aQ6QIY3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Scn10aQ6QIY3 Scarna2-201ENSMUST00000157560 414 ntBASIC28.1■■■□□ 2.09
Scn10aQ6QIY3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Scn10aQ6QIY3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.09■■■□□ 2.09
Scn10aQ6QIY3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Scn10aQ6QIY3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Scn10aQ6QIY3 Gm45364-201ENSMUST00000210883 159 ntBASIC28.08■■■□□ 2.09
Scn10aQ6QIY3 Gm9806-201ENSMUST00000051080 552 ntBASIC28.08■■■□□ 2.09
Scn10aQ6QIY3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.08■■■□□ 2.09
Scn10aQ6QIY3 Gm4799-201ENSMUST00000095396 657 ntBASIC28.08■■■□□ 2.09
Scn10aQ6QIY3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.07■■■□□ 2.08
Scn10aQ6QIY3 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.06■■■□□ 2.08
Scn10aQ6QIY3 Gm11687-201ENSMUST00000118911 886 ntBASIC28.06■■■□□ 2.08
Scn10aQ6QIY3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.06■■■□□ 2.08
Scn10aQ6QIY3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.05■■■□□ 2.08
Scn10aQ6QIY3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Scn10aQ6QIY3 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.03■■■□□ 2.08
Scn10aQ6QIY3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.02■■■□□ 2.08
Scn10aQ6QIY3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Scn10aQ6QIY3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Scn10aQ6QIY3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Scn10aQ6QIY3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Scn10aQ6QIY3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28■■■□□ 2.07
Scn10aQ6QIY3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Scn10aQ6QIY3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Scn10aQ6QIY3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Scn10aQ6QIY3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
Scn10aQ6QIY3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Scn10aQ6QIY3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms