Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Snrnp40Q6PE01 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Snrnp40Q6PE01 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Snrnp40Q6PE01 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.54■■□□□ 1.04
Snrnp40Q6PE01 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Snrnp40Q6PE01 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.53■■□□□ 1.04
Snrnp40Q6PE01 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Snrnp40Q6PE01 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Snrnp40Q6PE01 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Snrnp40Q6PE01 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Snrnp40Q6PE01 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Snrnp40Q6PE01 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Snrnp40Q6PE01 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Snrnp40Q6PE01 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Snrnp40Q6PE01 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Snrnp40Q6PE01 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Snrnp40Q6PE01 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Snrnp40Q6PE01 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Snrnp40Q6PE01 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Snrnp40Q6PE01 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Snrnp40Q6PE01 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Snrnp40Q6PE01 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp40Q6PE01 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp40Q6PE01 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp40Q6PE01 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.46■■□□□ 1.03
Snrnp40Q6PE01 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Snrnp40Q6PE01 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp40Q6PE01 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp40Q6PE01 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp40Q6PE01 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Scarna2-201ENSMUST00000157560 414 ntBASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
Snrnp40Q6PE01 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Snrnp40Q6PE01 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Snrnp40Q6PE01 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Snrnp40Q6PE01 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Snrnp40Q6PE01 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Snrnp40Q6PE01 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Snrnp40Q6PE01 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp40Q6PE01 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp40Q6PE01 Gm11687-201ENSMUST00000118911 886 ntBASIC21.38■■□□□ 1.01
Snrnp40Q6PE01 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snrnp40Q6PE01 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snrnp40Q6PE01 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Gm9806-201ENSMUST00000051080 552 ntBASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp40Q6PE01 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp40Q6PE01 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snrnp40Q6PE01 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Snrnp40Q6PE01 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Gm12366-201ENSMUST00000121722 873 ntBASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Gm5786-201ENSMUST00000085368 882 ntBASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Gm16437-201ENSMUST00000025669 507 ntBASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.33■■□□□ 1
Snrnp40Q6PE01 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Gm4799-201ENSMUST00000095396 657 ntBASIC21.32■■□□□ 1
Snrnp40Q6PE01 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.31■■□□□ 1
Snrnp40Q6PE01 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snrnp40Q6PE01 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snrnp40Q6PE01 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp40Q6PE01 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.3■■□□□ 1
Snrnp40Q6PE01 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.3■■□□□ 1
Snrnp40Q6PE01 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snrnp40Q6PE01 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.29■■□□□ 1
Snrnp40Q6PE01 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.28■■□□□ 1
Snrnp40Q6PE01 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.27■■□□□ 1
Snrnp40Q6PE01 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.27■■□□□ 1
Snrnp40Q6PE01 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.26■□□□□ 0.99
Snrnp40Q6PE01 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms