Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Srsf1Q6PDM2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.27■■□□□ 1
Srsf1Q6PDM2 Gm9806-201ENSMUST00000051080 552 ntBASIC21.27■■□□□ 1
Srsf1Q6PDM2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.27■■□□□ 1
Srsf1Q6PDM2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Srsf1Q6PDM2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Srsf1Q6PDM2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Srsf1Q6PDM2 Gm7332-201ENSMUST00000118351 454 ntBASIC21.24■□□□□ 0.99
Srsf1Q6PDM2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.24■□□□□ 0.99
Srsf1Q6PDM2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Srsf1Q6PDM2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Srsf1Q6PDM2 Gm16437-201ENSMUST00000025669 507 ntBASIC21.23■□□□□ 0.99
Srsf1Q6PDM2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srsf1Q6PDM2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Srsf1Q6PDM2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.22■□□□□ 0.99
Srsf1Q6PDM2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.22■□□□□ 0.99
Srsf1Q6PDM2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srsf1Q6PDM2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srsf1Q6PDM2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srsf1Q6PDM2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srsf1Q6PDM2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Srsf1Q6PDM2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Srsf1Q6PDM2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Srsf1Q6PDM2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.19■□□□□ 0.98
Srsf1Q6PDM2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Srsf1Q6PDM2 Gm27502-201ENSMUST00000183495 199 ntBASIC21.18■□□□□ 0.98
Srsf1Q6PDM2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Srsf1Q6PDM2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Srsf1Q6PDM2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Srsf1Q6PDM2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Srsf1Q6PDM2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Srsf1Q6PDM2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Srsf1Q6PDM2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Srsf1Q6PDM2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Srsf1Q6PDM2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Particl-201ENSMUST00000205370 1560 ntBASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Srsf1Q6PDM2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Srsf1Q6PDM2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Srsf1Q6PDM2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Srsf1Q6PDM2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srsf1Q6PDM2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srsf1Q6PDM2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srsf1Q6PDM2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srsf1Q6PDM2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srsf1Q6PDM2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Srsf1Q6PDM2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.12■□□□□ 0.97
Srsf1Q6PDM2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Srsf1Q6PDM2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Srsf1Q6PDM2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.11■□□□□ 0.97
Srsf1Q6PDM2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Srsf1Q6PDM2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srsf1Q6PDM2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Srsf1Q6PDM2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Srsf1Q6PDM2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Srsf1Q6PDM2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Srsf1Q6PDM2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.08■□□□□ 0.97
Srsf1Q6PDM2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.07■□□□□ 0.96
Srsf1Q6PDM2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Srsf1Q6PDM2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Srsf1Q6PDM2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Srsf1Q6PDM2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.05■□□□□ 0.96
Srsf1Q6PDM2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.05■□□□□ 0.96
Srsf1Q6PDM2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Srsf1Q6PDM2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.05■□□□□ 0.96
Srsf1Q6PDM2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Srsf1Q6PDM2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.04■□□□□ 0.96
Srsf1Q6PDM2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Srsf1Q6PDM2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Srsf1Q6PDM2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.03■□□□□ 0.96
Srsf1Q6PDM2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Srsf1Q6PDM2 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.03■□□□□ 0.96
Srsf1Q6PDM2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Srsf1Q6PDM2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srsf1Q6PDM2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Srsf1Q6PDM2 Gm15546-201ENSMUST00000122095 826 ntBASIC21.02■□□□□ 0.96
Srsf1Q6PDM2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.01■□□□□ 0.95
Srsf1Q6PDM2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Srsf1Q6PDM2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Srsf1Q6PDM2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srsf1Q6PDM2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srsf1Q6PDM2 Gm30023-201ENSMUST00000197970 889 ntBASIC21■□□□□ 0.95
Srsf1Q6PDM2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Srsf1Q6PDM2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Srsf1Q6PDM2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Srsf1Q6PDM2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Srsf1Q6PDM2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Srsf1Q6PDM2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Srsf1Q6PDM2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Srsf1Q6PDM2 Gm14523-201ENSMUST00000117260 558 ntBASIC20.96■□□□□ 0.95
Srsf1Q6PDM2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Srsf1Q6PDM2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Srsf1Q6PDM2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Srsf1Q6PDM2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms