Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Gm11599-201ENSMUST00000118720 878 ntBASIC20.9■□□□□ 0.94
Tff3Q62395 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.9■□□□□ 0.94
Tff3Q62395 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tff3Q62395 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tff3Q62395 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tff3Q62395 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tff3Q62395 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tff3Q62395 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.88■□□□□ 0.93
Tff3Q62395 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tff3Q62395 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.88■□□□□ 0.93
Tff3Q62395 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tff3Q62395 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tff3Q62395 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tff3Q62395 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tff3Q62395 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
Tff3Q62395 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tff3Q62395 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tff3Q62395 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tff3Q62395 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tff3Q62395 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tff3Q62395 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tff3Q62395 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tff3Q62395 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tff3Q62395 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tff3Q62395 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tff3Q62395 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tff3Q62395 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tff3Q62395 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tff3Q62395 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tff3Q62395 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tff3Q62395 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.8■□□□□ 0.92
Tff3Q62395 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tff3Q62395 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tff3Q62395 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.79■□□□□ 0.92
Tff3Q62395 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tff3Q62395 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tff3Q62395 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Tff3Q62395 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tff3Q62395 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tff3Q62395 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tff3Q62395 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tff3Q62395 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tff3Q62395 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.74■□□□□ 0.91
Tff3Q62395 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tff3Q62395 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.72■□□□□ 0.91
Tff3Q62395 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tff3Q62395 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tff3Q62395 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tff3Q62395 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.71■□□□□ 0.91
Tff3Q62395 Particl-201ENSMUST00000205370 1560 ntBASIC20.71■□□□□ 0.91
Tff3Q62395 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tff3Q62395 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.7■□□□□ 0.9
Tff3Q62395 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.7■□□□□ 0.9
Tff3Q62395 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.7■□□□□ 0.9
Tff3Q62395 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tff3Q62395 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.68■□□□□ 0.9
Tff3Q62395 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tff3Q62395 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tff3Q62395 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tff3Q62395 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tff3Q62395 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tff3Q62395 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tff3Q62395 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tff3Q62395 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tff3Q62395 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tff3Q62395 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.66■□□□□ 0.9
Tff3Q62395 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.65■□□□□ 0.9
Tff3Q62395 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tff3Q62395 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tff3Q62395 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tff3Q62395 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.65■□□□□ 0.9
Tff3Q62395 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tff3Q62395 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tff3Q62395 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tff3Q62395 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tff3Q62395 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.64■□□□□ 0.89
Tff3Q62395 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.64■□□□□ 0.89
Tff3Q62395 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tff3Q62395 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.63■□□□□ 0.89
Tff3Q62395 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Tff3Q62395 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Tff3Q62395 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tff3Q62395 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.61■□□□□ 0.89
Tff3Q62395 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tff3Q62395 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tff3Q62395 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tff3Q62395 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tff3Q62395 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tff3Q62395 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tff3Q62395 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tff3Q62395 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tff3Q62395 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tff3Q62395 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
Tff3Q62395 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Tff3Q62395 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tff3Q62395 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Tff3Q62395 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Tff3Q62395 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tff3Q62395 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tff3Q62395 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms