Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.16■□□□□ 0.5
Notch3Q61982 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Notch3Q61982 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Notch3Q61982 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Notch3Q61982 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Notch3Q61982 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.15■□□□□ 0.5
Notch3Q61982 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.15■□□□□ 0.5
Notch3Q61982 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Notch3Q61982 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.15■□□□□ 0.5
Notch3Q61982 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.14■□□□□ 0.49
Notch3Q61982 Gm6311-201ENSMUST00000073790 878 ntBASIC18.13■□□□□ 0.49
Notch3Q61982 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Notch3Q61982 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Notch3Q61982 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Notch3Q61982 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Notch3Q61982 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Notch3Q61982 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Notch3Q61982 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Notch3Q61982 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Notch3Q61982 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Notch3Q61982 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.11■□□□□ 0.49
Notch3Q61982 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Notch3Q61982 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Notch3Q61982 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Notch3Q61982 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Notch3Q61982 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.09■□□□□ 0.49
Notch3Q61982 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.09■□□□□ 0.49
Notch3Q61982 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.09■□□□□ 0.49
Notch3Q61982 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Notch3Q61982 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Notch3Q61982 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.07■□□□□ 0.48
Notch3Q61982 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.07■□□□□ 0.48
Notch3Q61982 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Notch3Q61982 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Notch3Q61982 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Notch3Q61982 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Notch3Q61982 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Notch3Q61982 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Notch3Q61982 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Notch3Q61982 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Notch3Q61982 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Notch3Q61982 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.03■□□□□ 0.48
Notch3Q61982 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.03■□□□□ 0.48
Notch3Q61982 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Notch3Q61982 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.03■□□□□ 0.48
Notch3Q61982 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.03■□□□□ 0.48
Notch3Q61982 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Notch3Q61982 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Notch3Q61982 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Notch3Q61982 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Notch3Q61982 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Notch3Q61982 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Notch3Q61982 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Notch3Q61982 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Notch3Q61982 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18■□□□□ 0.47
Notch3Q61982 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Notch3Q61982 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Notch3Q61982 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Notch3Q61982 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.99■□□□□ 0.47
Notch3Q61982 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Notch3Q61982 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Notch3Q61982 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Notch3Q61982 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Notch3Q61982 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Notch3Q61982 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.98■□□□□ 0.47
Notch3Q61982 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Notch3Q61982 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Notch3Q61982 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.96■□□□□ 0.47
Notch3Q61982 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Notch3Q61982 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Notch3Q61982 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Notch3Q61982 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Notch3Q61982 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Notch3Q61982 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Notch3Q61982 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Notch3Q61982 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Notch3Q61982 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Notch3Q61982 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Notch3Q61982 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Notch3Q61982 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Notch3Q61982 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Notch3Q61982 Gm30023-201ENSMUST00000197970 889 ntBASIC17.92■□□□□ 0.46
Notch3Q61982 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.92■□□□□ 0.46
Notch3Q61982 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Notch3Q61982 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Notch3Q61982 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Notch3Q61982 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Notch3Q61982 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Notch3Q61982 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.88■□□□□ 0.45
Notch3Q61982 Gm12366-201ENSMUST00000121722 873 ntBASIC17.88■□□□□ 0.45
Notch3Q61982 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.88■□□□□ 0.45
Notch3Q61982 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms