Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd47Q61735 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd47Q61735 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cd47Q61735 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cd47Q61735 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cd47Q61735 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Cd47Q61735 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cd47Q61735 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cd47Q61735 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.59■■□□□ 1.05
Cd47Q61735 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cd47Q61735 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Cd47Q61735 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.58■■□□□ 1.05
Cd47Q61735 Gm9397-201ENSMUST00000200125 605 ntBASIC21.58■■□□□ 1.05
Cd47Q61735 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cd47Q61735 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cd47Q61735 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.56■■□□□ 1.04
Cd47Q61735 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cd47Q61735 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.55■■□□□ 1.04
Cd47Q61735 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cd47Q61735 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.54■■□□□ 1.04
Cd47Q61735 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cd47Q61735 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.54■■□□□ 1.04
Cd47Q61735 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.54■■□□□ 1.04
Cd47Q61735 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cd47Q61735 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cd47Q61735 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cd47Q61735 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cd47Q61735 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cd47Q61735 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cd47Q61735 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cd47Q61735 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cd47Q61735 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cd47Q61735 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cd47Q61735 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cd47Q61735 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cd47Q61735 Gm24970-201ENSMUST00000175582 82 ntBASIC21.5■■□□□ 1.03
Cd47Q61735 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cd47Q61735 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cd47Q61735 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cd47Q61735 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cd47Q61735 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.48■■□□□ 1.03
Cd47Q61735 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.48■■□□□ 1.03
Cd47Q61735 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cd47Q61735 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.46■■□□□ 1.03
Cd47Q61735 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Cd47Q61735 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cd47Q61735 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cd47Q61735 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd47Q61735 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd47Q61735 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cd47Q61735 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.44■■□□□ 1.02
Cd47Q61735 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd47Q61735 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.44■■□□□ 1.02
Cd47Q61735 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd47Q61735 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd47Q61735 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd47Q61735 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Cd47Q61735 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd47Q61735 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.42■■□□□ 1.02
Cd47Q61735 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd47Q61735 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd47Q61735 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cd47Q61735 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.41■■□□□ 1.02
Cd47Q61735 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.41■■□□□ 1.02
Cd47Q61735 Gm45855-201ENSMUST00000212546 880 ntBASIC21.41■■□□□ 1.02
Cd47Q61735 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cd47Q61735 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cd47Q61735 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd47Q61735 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd47Q61735 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd47Q61735 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cd47Q61735 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cd47Q61735 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cd47Q61735 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cd47Q61735 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cd47Q61735 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cd47Q61735 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd47Q61735 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd47Q61735 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cd47Q61735 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cd47Q61735 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cd47Q61735 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd47Q61735 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd47Q61735 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd47Q61735 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd47Q61735 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cd47Q61735 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cd47Q61735 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd47Q61735 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cd47Q61735 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
Cd47Q61735 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd47Q61735 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd47Q61735 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd47Q61735 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd47Q61735 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd47Q61735 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.32■■□□□ 1
Cd47Q61735 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd47Q61735 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cd47Q61735 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cd47Q61735 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms