Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-2Q5R1I3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav7-2Q5R1I3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-2Q5R1I3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trav7-2Q5R1I3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trav7-2Q5R1I3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Trav7-2Q5R1I3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-2Q5R1I3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-2Q5R1I3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-2Q5R1I3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-2Q5R1I3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-2Q5R1I3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav7-2Q5R1I3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-2Q5R1I3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-2Q5R1I3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav7-2Q5R1I3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-2Q5R1I3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav7-2Q5R1I3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-2Q5R1I3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav7-2Q5R1I3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-2Q5R1I3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.5■□□□□ 0.39
Trav7-2Q5R1I3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-2Q5R1I3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-2Q5R1I3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-2Q5R1I3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-2Q5R1I3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-2Q5R1I3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-2Q5R1I3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-2Q5R1I3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.47■□□□□ 0.39
Trav7-2Q5R1I3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-2Q5R1I3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-2Q5R1I3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.46■□□□□ 0.39
Trav7-2Q5R1I3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-2Q5R1I3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-2Q5R1I3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-2Q5R1I3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-2Q5R1I3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-2Q5R1I3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav7-2Q5R1I3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-2Q5R1I3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-2Q5R1I3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-2Q5R1I3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-2Q5R1I3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-2Q5R1I3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-2Q5R1I3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-2Q5R1I3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Trav7-2Q5R1I3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-2Q5R1I3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-2Q5R1I3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav7-2Q5R1I3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav7-2Q5R1I3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-2Q5R1I3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-2Q5R1I3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav7-2Q5R1I3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-2Q5R1I3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-2Q5R1I3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-2Q5R1I3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-2Q5R1I3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-2Q5R1I3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-2Q5R1I3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-2Q5R1I3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-2Q5R1I3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-2Q5R1I3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav7-2Q5R1I3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.4■□□□□ 0.38
Trav7-2Q5R1I3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav7-2Q5R1I3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-2Q5R1I3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-2Q5R1I3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-2Q5R1I3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-2Q5R1I3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-2Q5R1I3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-2Q5R1I3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-2Q5R1I3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-2Q5R1I3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav7-2Q5R1I3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-2Q5R1I3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-2Q5R1I3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-2Q5R1I3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-2Q5R1I3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav7-2Q5R1I3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav7-2Q5R1I3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-2Q5R1I3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-2Q5R1I3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-2Q5R1I3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-2Q5R1I3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav7-2Q5R1I3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav7-2Q5R1I3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-2Q5R1I3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-2Q5R1I3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-2Q5R1I3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-2Q5R1I3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-2Q5R1I3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-2Q5R1I3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-2Q5R1I3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-2Q5R1I3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-2Q5R1I3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-2Q5R1I3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav7-2Q5R1I3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7-2Q5R1I3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7-2Q5R1I3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms