Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcp4P63054 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcp4P63054 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcp4P63054 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcp4P63054 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcp4P63054 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcp4P63054 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcp4P63054 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcp4P63054 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcp4P63054 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Pcp4P63054 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcp4P63054 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcp4P63054 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcp4P63054 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcp4P63054 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcp4P63054 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcp4P63054 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcp4P63054 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Pcp4P63054 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcp4P63054 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcp4P63054 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcp4P63054 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcp4P63054 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcp4P63054 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
Pcp4P63054 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.45■□□□□ 0.22
Pcp4P63054 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcp4P63054 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcp4P63054 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcp4P63054 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcp4P63054 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcp4P63054 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcp4P63054 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcp4P63054 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcp4P63054 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Pcp4P63054 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcp4P63054 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcp4P63054 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcp4P63054 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcp4P63054 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcp4P63054 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcp4P63054 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcp4P63054 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcp4P63054 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcp4P63054 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcp4P63054 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcp4P63054 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcp4P63054 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Pcp4P63054 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcp4P63054 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcp4P63054 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcp4P63054 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcp4P63054 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcp4P63054 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcp4P63054 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcp4P63054 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcp4P63054 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcp4P63054 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcp4P63054 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcp4P63054 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.37■□□□□ 0.21
Pcp4P63054 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcp4P63054 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcp4P63054 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcp4P63054 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcp4P63054 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcp4P63054 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcp4P63054 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcp4P63054 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4P63054 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcp4P63054 Iqck-206ENSMUST00000208658 2891 ntBASIC16.33■□□□□ 0.21
Pcp4P63054 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcp4P63054 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4P63054 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcp4P63054 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4P63054 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcp4P63054 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcp4P63054 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4P63054 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4P63054 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4P63054 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4P63054 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcp4P63054 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4P63054 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcp4P63054 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4P63054 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4P63054 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcp4P63054 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcp4P63054 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.3■□□□□ 0.2
Pcp4P63054 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Pcp4P63054 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4P63054 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Pcp4P63054 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4P63054 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4P63054 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcp4P63054 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcp4P63054 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcp4P63054 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcp4P63054 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcp4P63054 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Pcp4P63054 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcp4P63054 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms