Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm6P62313 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Lsm6P62313 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm6P62313 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Lsm6P62313 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm6P62313 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm6P62313 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm6P62313 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Lsm6P62313 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm6P62313 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm6P62313 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Lsm6P62313 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm6P62313 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.94■□□□□ 0.94
Lsm6P62313 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm6P62313 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm6P62313 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm6P62313 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm6P62313 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm6P62313 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Lsm6P62313 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm6P62313 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm6P62313 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm6P62313 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm6P62313 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Lsm6P62313 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Lsm6P62313 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.89■□□□□ 0.93
Lsm6P62313 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm6P62313 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm6P62313 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm6P62313 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Lsm6P62313 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm6P62313 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.86■□□□□ 0.93
Lsm6P62313 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lsm6P62313 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm6P62313 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Lsm6P62313 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.84■□□□□ 0.93
Lsm6P62313 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Lsm6P62313 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm6P62313 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Lsm6P62313 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm6P62313 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm6P62313 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lsm6P62313 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm6P62313 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm6P62313 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm6P62313 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm6P62313 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Lsm6P62313 Gm30023-201ENSMUST00000197970 889 ntBASIC20.81■□□□□ 0.92
Lsm6P62313 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.81■□□□□ 0.92
Lsm6P62313 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm6P62313 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lsm6P62313 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm6P62313 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm6P62313 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm6P62313 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm6P62313 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm6P62313 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm6P62313 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.78■□□□□ 0.92
Lsm6P62313 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm6P62313 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm6P62313 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm6P62313 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Lsm6P62313 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm6P62313 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm6P62313 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm6P62313 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm6P62313 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lsm6P62313 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm6P62313 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm6P62313 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.74■□□□□ 0.91
Lsm6P62313 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.73■□□□□ 0.91
Lsm6P62313 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm6P62313 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.71■□□□□ 0.91
Lsm6P62313 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.71■□□□□ 0.91
Lsm6P62313 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.71■□□□□ 0.91
Lsm6P62313 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm6P62313 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm6P62313 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm6P62313 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Lsm6P62313 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.7■□□□□ 0.9
Lsm6P62313 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Lsm6P62313 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm6P62313 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm6P62313 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms