Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Limk1P53668 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Limk1P53668 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Limk1P53668 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Limk1P53668 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Limk1P53668 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Limk1P53668 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Limk1P53668 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.53■■□□□ 1.36
Limk1P53668 Gm12366-201ENSMUST00000121722 873 ntBASIC23.53■■□□□ 1.36
Limk1P53668 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.53■■□□□ 1.36
Limk1P53668 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.53■■□□□ 1.36
Limk1P53668 Gm5786-201ENSMUST00000085368 882 ntBASIC23.53■■□□□ 1.36
Limk1P53668 Zxda-201ENSMUST00000117281 2621 ntBASIC23.52■■□□□ 1.36
Limk1P53668 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Limk1P53668 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Limk1P53668 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.52■■□□□ 1.36
Limk1P53668 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.51■■□□□ 1.35
Limk1P53668 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.51■■□□□ 1.35
Limk1P53668 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Limk1P53668 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Limk1P53668 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Limk1P53668 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.5■■□□□ 1.35
Limk1P53668 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Limk1P53668 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Limk1P53668 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Limk1P53668 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Limk1P53668 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Limk1P53668 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.49■■□□□ 1.35
Limk1P53668 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.49■■□□□ 1.35
Limk1P53668 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Limk1P53668 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Limk1P53668 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Limk1P53668 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Limk1P53668 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Limk1P53668 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Limk1P53668 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Limk1P53668 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Limk1P53668 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Limk1P53668 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Limk1P53668 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Limk1P53668 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.47■■□□□ 1.35
Limk1P53668 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Limk1P53668 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Limk1P53668 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Limk1P53668 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Limk1P53668 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Limk1P53668 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Limk1P53668 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Limk1P53668 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Limk1P53668 Particl-201ENSMUST00000205370 1560 ntBASIC23.44■■□□□ 1.34
Limk1P53668 Gm11687-201ENSMUST00000118911 886 ntBASIC23.43■■□□□ 1.34
Limk1P53668 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Limk1P53668 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Limk1P53668 Scarna2-201ENSMUST00000157560 414 ntBASIC23.41■■□□□ 1.34
Limk1P53668 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Limk1P53668 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Limk1P53668 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Limk1P53668 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Limk1P53668 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
Limk1P53668 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Limk1P53668 Gm9806-201ENSMUST00000051080 552 ntBASIC23.39■■□□□ 1.33
Limk1P53668 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Limk1P53668 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Limk1P53668 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Limk1P53668 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.37■■□□□ 1.33
Limk1P53668 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Limk1P53668 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Limk1P53668 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Limk1P53668 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Limk1P53668 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Limk1P53668 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Limk1P53668 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Limk1P53668 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Limk1P53668 Gm4799-201ENSMUST00000095396 657 ntBASIC23.33■■□□□ 1.33
Limk1P53668 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.32■■□□□ 1.32
Limk1P53668 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Limk1P53668 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.32■■□□□ 1.32
Limk1P53668 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.32■■□□□ 1.32
Limk1P53668 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.32■■□□□ 1.32
Limk1P53668 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Limk1P53668 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Limk1P53668 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Limk1P53668 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Limk1P53668 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Limk1P53668 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.3■■□□□ 1.32
Limk1P53668 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Limk1P53668 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.3■■□□□ 1.32
Limk1P53668 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Limk1P53668 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Limk1P53668 Gm7332-201ENSMUST00000118351 454 ntBASIC23.29■■□□□ 1.32
Limk1P53668 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Limk1P53668 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Limk1P53668 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Limk1P53668 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Limk1P53668 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Limk1P53668 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Limk1P53668 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.27■■□□□ 1.32
Limk1P53668 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Limk1P53668 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Limk1P53668 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms