Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.96■■□□□ 1.43
Lbx1P52955 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.96■■□□□ 1.43
Lbx1P52955 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.96■■□□□ 1.43
Lbx1P52955 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Lbx1P52955 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.95■■□□□ 1.42
Lbx1P52955 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Lbx1P52955 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Lbx1P52955 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Lbx1P52955 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Lbx1P52955 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lbx1P52955 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lbx1P52955 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lbx1P52955 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Lbx1P52955 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lbx1P52955 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Lbx1P52955 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.92■■□□□ 1.42
Lbx1P52955 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Lbx1P52955 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Lbx1P52955 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.91■■□□□ 1.42
Lbx1P52955 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.91■■□□□ 1.42
Lbx1P52955 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.91■■□□□ 1.42
Lbx1P52955 Gm5921-201ENSMUST00000075898 882 ntBASIC23.89■■□□□ 1.41
Lbx1P52955 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.88■■□□□ 1.41
Lbx1P52955 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lbx1P52955 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lbx1P52955 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.87■■□□□ 1.41
Lbx1P52955 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.87■■□□□ 1.41
Lbx1P52955 Rps24-207ENSMUST00000224568 714 ntBASIC23.86■■□□□ 1.41
Lbx1P52955 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lbx1P52955 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Lbx1P52955 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lbx1P52955 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lbx1P52955 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Lbx1P52955 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.83■■□□□ 1.41
Lbx1P52955 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lbx1P52955 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lbx1P52955 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Lbx1P52955 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lbx1P52955 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lbx1P52955 Gm14523-201ENSMUST00000117260 558 ntBASIC23.81■■□□□ 1.4
Lbx1P52955 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Lbx1P52955 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Lbx1P52955 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lbx1P52955 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lbx1P52955 Particl-201ENSMUST00000205370 1560 ntBASIC23.78■■□□□ 1.4
Lbx1P52955 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.78■■□□□ 1.4
Lbx1P52955 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lbx1P52955 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Lbx1P52955 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Lbx1P52955 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Lbx1P52955 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Lbx1P52955 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.76■■□□□ 1.39
Lbx1P52955 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lbx1P52955 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.75■■□□□ 1.39
Lbx1P52955 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lbx1P52955 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.74■■□□□ 1.39
Lbx1P52955 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lbx1P52955 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lbx1P52955 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lbx1P52955 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lbx1P52955 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Lbx1P52955 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lbx1P52955 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.71■■□□□ 1.39
Lbx1P52955 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Lbx1P52955 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Lbx1P52955 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Lbx1P52955 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lbx1P52955 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Lbx1P52955 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lbx1P52955 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Lbx1P52955 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.68■■□□□ 1.38
Lbx1P52955 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lbx1P52955 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lbx1P52955 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Lbx1P52955 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.67■■□□□ 1.38
Lbx1P52955 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lbx1P52955 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Lbx1P52955 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lbx1P52955 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.66■■□□□ 1.38
Lbx1P52955 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Lbx1P52955 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lbx1P52955 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lbx1P52955 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.65■■□□□ 1.38
Lbx1P52955 Gm15820-201ENSMUST00000201566 728 ntBASIC23.65■■□□□ 1.38
Lbx1P52955 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Lbx1P52955 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.64■■□□□ 1.37
Lbx1P52955 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.64■■□□□ 1.37
Lbx1P52955 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.64■■□□□ 1.37
Lbx1P52955 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lbx1P52955 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lbx1P52955 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Lbx1P52955 Gm10420-201ENSMUST00000121713 882 ntBASIC23.63■■□□□ 1.37
Lbx1P52955 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lbx1P52955 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lbx1P52955 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.62■■□□□ 1.37
Lbx1P52955 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lbx1P52955 Gm14117-201ENSMUST00000122417 843 ntBASIC23.6■■□□□ 1.37
Lbx1P52955 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.6■■□□□ 1.37
Lbx1P52955 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Lbx1P52955 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms