Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rplp1P47955 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rplp1P47955 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rplp1P47955 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.37■□□□□ 0.69
Rplp1P47955 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rplp1P47955 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rplp1P47955 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.37■□□□□ 0.69
Rplp1P47955 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rplp1P47955 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rplp1P47955 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rplp1P47955 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rplp1P47955 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rplp1P47955 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rplp1P47955 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rplp1P47955 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.35■□□□□ 0.69
Rplp1P47955 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rplp1P47955 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Rplp1P47955 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.34■□□□□ 0.69
Rplp1P47955 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rplp1P47955 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rplp1P47955 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rplp1P47955 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.34■□□□□ 0.69
Rplp1P47955 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rplp1P47955 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rplp1P47955 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rplp1P47955 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rplp1P47955 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rplp1P47955 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rplp1P47955 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rplp1P47955 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rplp1P47955 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Rplp1P47955 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.3■□□□□ 0.68
Rplp1P47955 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.29■□□□□ 0.68
Rplp1P47955 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rplp1P47955 Gm6821-201ENSMUST00000107540 542 ntBASIC19.28■□□□□ 0.68
Rplp1P47955 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rplp1P47955 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rplp1P47955 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rplp1P47955 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rplp1P47955 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rplp1P47955 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rplp1P47955 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.27■□□□□ 0.68
Rplp1P47955 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.27■□□□□ 0.67
Rplp1P47955 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rplp1P47955 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rplp1P47955 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rplp1P47955 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rplp1P47955 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rplp1P47955 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rplp1P47955 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rplp1P47955 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rplp1P47955 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rplp1P47955 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rplp1P47955 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rplp1P47955 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rplp1P47955 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rplp1P47955 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rplp1P47955 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.24■□□□□ 0.67
Rplp1P47955 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.24■□□□□ 0.67
Rplp1P47955 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rplp1P47955 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rplp1P47955 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rplp1P47955 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.23■□□□□ 0.67
Rplp1P47955 Gm8503-201ENSMUST00000118131 455 ntBASIC19.23■□□□□ 0.67
Rplp1P47955 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rplp1P47955 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rplp1P47955 Nkain2-201ENSMUST00000092602 558 ntBASIC19.23■□□□□ 0.67
Rplp1P47955 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rplp1P47955 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rplp1P47955 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rplp1P47955 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.22■□□□□ 0.67
Rplp1P47955 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rplp1P47955 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rplp1P47955 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rplp1P47955 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rplp1P47955 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rplp1P47955 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rplp1P47955 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rplp1P47955 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.19■□□□□ 0.66
Rplp1P47955 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rplp1P47955 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rplp1P47955 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rplp1P47955 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rplp1P47955 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rplp1P47955 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rplp1P47955 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rplp1P47955 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Rplp1P47955 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rplp1P47955 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rplp1P47955 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rplp1P47955 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rplp1P47955 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.16■□□□□ 0.66
Rplp1P47955 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rplp1P47955 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rplp1P47955 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rplp1P47955 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rplp1P47955 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rplp1P47955 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rplp1P47955 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rplp1P47955 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms