Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Nkx2-6P43688 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nkx2-6P43688 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Nkx2-6P43688 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Nkx2-6P43688 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.74■■□□□ 1.23
Nkx2-6P43688 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nkx2-6P43688 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nkx2-6P43688 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Nkx2-6P43688 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.74■■□□□ 1.23
Nkx2-6P43688 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.73■■□□□ 1.23
Nkx2-6P43688 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.73■■□□□ 1.23
Nkx2-6P43688 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nkx2-6P43688 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.72■■□□□ 1.23
Nkx2-6P43688 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nkx2-6P43688 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Nkx2-6P43688 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nkx2-6P43688 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nkx2-6P43688 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nkx2-6P43688 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nkx2-6P43688 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Nkx2-6P43688 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Nkx2-6P43688 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.67■■□□□ 1.22
Nkx2-6P43688 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Nkx2-6P43688 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.67■■□□□ 1.22
Nkx2-6P43688 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Nkx2-6P43688 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nkx2-6P43688 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.66■■□□□ 1.22
Nkx2-6P43688 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
Nkx2-6P43688 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.65■■□□□ 1.22
Nkx2-6P43688 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Nkx2-6P43688 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nkx2-6P43688 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.64■■□□□ 1.22
Nkx2-6P43688 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Nkx2-6P43688 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Nkx2-6P43688 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Nkx2-6P43688 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.64■■□□□ 1.21
Nkx2-6P43688 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.64■■□□□ 1.21
Nkx2-6P43688 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nkx2-6P43688 Gm30023-201ENSMUST00000197970 889 ntBASIC22.63■■□□□ 1.21
Nkx2-6P43688 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nkx2-6P43688 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nkx2-6P43688 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.62■■□□□ 1.21
Nkx2-6P43688 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nkx2-6P43688 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nkx2-6P43688 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nkx2-6P43688 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Nkx2-6P43688 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nkx2-6P43688 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Nkx2-6P43688 Particl-201ENSMUST00000205370 1560 ntBASIC22.59■■□□□ 1.21
Nkx2-6P43688 Mir6538-201ENSMUST00000183713 110 ntBASIC22.58■■□□□ 1.21
Nkx2-6P43688 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nkx2-6P43688 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nkx2-6P43688 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nkx2-6P43688 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nkx2-6P43688 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.57■■□□□ 1.2
Nkx2-6P43688 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nkx2-6P43688 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Nkx2-6P43688 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.55■■□□□ 1.2
Nkx2-6P43688 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx2-6P43688 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx2-6P43688 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Nkx2-6P43688 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Nkx2-6P43688 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nkx2-6P43688 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Nkx2-6P43688 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx2-6P43688 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx2-6P43688 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Nkx2-6P43688 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx2-6P43688 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx2-6P43688 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Nkx2-6P43688 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nkx2-6P43688 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nkx2-6P43688 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nkx2-6P43688 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nkx2-6P43688 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-6P43688 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-6P43688 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-6P43688 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.49■■□□□ 1.19
Nkx2-6P43688 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nkx2-6P43688 Gm11175-201ENSMUST00000116172 543 ntBASIC22.48■■□□□ 1.19
Nkx2-6P43688 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nkx2-6P43688 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nkx2-6P43688 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Nkx2-6P43688 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nkx2-6P43688 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Nkx2-6P43688 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nkx2-6P43688 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Nkx2-6P43688 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Nkx2-6P43688 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Nkx2-6P43688 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nkx2-6P43688 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Nkx2-6P43688 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nkx2-6P43688 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.42■■□□□ 1.18
Nkx2-6P43688 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Nkx2-6P43688 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.41■■□□□ 1.18
Nkx2-6P43688 Amer2-203ENSMUST00000225247 2662 ntBASIC22.41■■□□□ 1.18
Nkx2-6P43688 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Nkx2-6P43688 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Nkx2-6P43688 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.39■■□□□ 1.17
Nkx2-6P43688 Gm6311-201ENSMUST00000073790 878 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms