Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Scarna2-201ENSMUST00000157560 414 ntBASIC26.94■■□□□ 1.9
HttP42859 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
HttP42859 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HttP42859 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
HttP42859 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.93■■□□□ 1.9
HttP42859 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.92■■□□□ 1.9
HttP42859 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.92■■□□□ 1.9
HttP42859 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.92■■□□□ 1.9
HttP42859 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.9■■□□□ 1.9
HttP42859 Gm9806-201ENSMUST00000051080 552 ntBASIC26.9■■□□□ 1.9
HttP42859 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.89■■□□□ 1.89
HttP42859 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
HttP42859 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HttP42859 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HttP42859 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
HttP42859 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
HttP42859 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
HttP42859 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HttP42859 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HttP42859 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
HttP42859 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
HttP42859 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
HttP42859 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
HttP42859 Gm11687-201ENSMUST00000118911 886 ntBASIC26.82■■□□□ 1.88
HttP42859 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HttP42859 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HttP42859 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
HttP42859 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
HttP42859 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
HttP42859 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
HttP42859 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
HttP42859 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
HttP42859 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
HttP42859 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
HttP42859 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
HttP42859 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
HttP42859 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HttP42859 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
HttP42859 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HttP42859 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
HttP42859 Gm16437-201ENSMUST00000025669 507 ntBASIC26.73■■□□□ 1.87
HttP42859 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
HttP42859 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.73■■□□□ 1.87
HttP42859 Particl-201ENSMUST00000205370 1560 ntBASIC26.73■■□□□ 1.87
HttP42859 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.72■■□□□ 1.87
HttP42859 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HttP42859 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HttP42859 Gm7332-201ENSMUST00000118351 454 ntBASIC26.71■■□□□ 1.87
HttP42859 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.71■■□□□ 1.87
HttP42859 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HttP42859 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
HttP42859 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
HttP42859 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
HttP42859 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HttP42859 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HttP42859 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HttP42859 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.68■■□□□ 1.86
HttP42859 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.68■■□□□ 1.86
HttP42859 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HttP42859 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HttP42859 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
HttP42859 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.64■■□□□ 1.86
HttP42859 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
HttP42859 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
HttP42859 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.62■■□□□ 1.85
HttP42859 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HttP42859 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
HttP42859 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
HttP42859 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.61■■□□□ 1.85
HttP42859 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HttP42859 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
HttP42859 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.61■■□□□ 1.85
HttP42859 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HttP42859 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HttP42859 Gm27502-201ENSMUST00000183495 199 ntBASIC26.61■■□□□ 1.85
HttP42859 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HttP42859 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
HttP42859 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HttP42859 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.6■■□□□ 1.85
HttP42859 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HttP42859 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
HttP42859 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
HttP42859 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
HttP42859 Gm14523-201ENSMUST00000117260 558 ntBASIC26.57■■□□□ 1.84
HttP42859 Gm45364-201ENSMUST00000210883 159 ntBASIC26.56■■□□□ 1.84
HttP42859 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HttP42859 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HttP42859 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
HttP42859 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HttP42859 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.55■■□□□ 1.84
HttP42859 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HttP42859 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HttP42859 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
HttP42859 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HttP42859 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
HttP42859 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.52■■□□□ 1.84
HttP42859 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
HttP42859 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.51■■□□□ 1.83
HttP42859 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.5■■□□□ 1.83
HttP42859 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms