Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.16■■□□□ 1.46
RxrbP28704 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RxrbP28704 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RxrbP28704 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RxrbP28704 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RxrbP28704 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RxrbP28704 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
RxrbP28704 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RxrbP28704 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RxrbP28704 Gm24804-201ENSMUST00000174982 85 ntBASIC24.11■■□□□ 1.45
RxrbP28704 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RxrbP28704 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RxrbP28704 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RxrbP28704 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RxrbP28704 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RxrbP28704 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RxrbP28704 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RxrbP28704 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RxrbP28704 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
RxrbP28704 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RxrbP28704 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RxrbP28704 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RxrbP28704 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RxrbP28704 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RxrbP28704 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.05■■□□□ 1.44
RxrbP28704 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RxrbP28704 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
RxrbP28704 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
RxrbP28704 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RxrbP28704 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RxrbP28704 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RxrbP28704 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RxrbP28704 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
RxrbP28704 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RxrbP28704 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RxrbP28704 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RxrbP28704 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.03■■□□□ 1.44
RxrbP28704 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RxrbP28704 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RxrbP28704 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RxrbP28704 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
RxrbP28704 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RxrbP28704 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
RxrbP28704 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RxrbP28704 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24■■□□□ 1.43
RxrbP28704 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.99■■□□□ 1.43
RxrbP28704 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RxrbP28704 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RxrbP28704 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RxrbP28704 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RxrbP28704 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RxrbP28704 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.96■■□□□ 1.43
RxrbP28704 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
RxrbP28704 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RxrbP28704 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RxrbP28704 Gm16148-201ENSMUST00000119653 893 ntBASIC23.95■■□□□ 1.42
RxrbP28704 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RxrbP28704 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RxrbP28704 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RxrbP28704 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
RxrbP28704 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RxrbP28704 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RxrbP28704 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RxrbP28704 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
RxrbP28704 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RxrbP28704 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RxrbP28704 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RxrbP28704 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RxrbP28704 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RxrbP28704 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.91■■□□□ 1.42
RxrbP28704 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RxrbP28704 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RxrbP28704 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
RxrbP28704 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
RxrbP28704 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RxrbP28704 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RxrbP28704 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RxrbP28704 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RxrbP28704 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RxrbP28704 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RxrbP28704 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RxrbP28704 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RxrbP28704 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RxrbP28704 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RxrbP28704 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RxrbP28704 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RxrbP28704 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RxrbP28704 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RxrbP28704 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RxrbP28704 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RxrbP28704 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
RxrbP28704 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RxrbP28704 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RxrbP28704 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RxrbP28704 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RxrbP28704 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RxrbP28704 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RxrbP28704 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RxrbP28704 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.8■■□□□ 1.4
RxrbP28704 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms