Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl6P27784 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl6P27784 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl6P27784 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl6P27784 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl6P27784 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl6P27784 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccl6P27784 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl6P27784 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl6P27784 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ccl6P27784 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl6P27784 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl6P27784 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl6P27784 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl6P27784 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl6P27784 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ccl6P27784 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl6P27784 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.44■□□□□ 0.54
Ccl6P27784 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ccl6P27784 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccl6P27784 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ccl6P27784 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccl6P27784 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccl6P27784 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccl6P27784 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccl6P27784 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccl6P27784 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccl6P27784 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ccl6P27784 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccl6P27784 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl6P27784 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl6P27784 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl6P27784 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl6P27784 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccl6P27784 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ccl6P27784 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccl6P27784 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Ccl6P27784 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl6P27784 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl6P27784 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccl6P27784 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccl6P27784 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccl6P27784 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccl6P27784 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccl6P27784 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccl6P27784 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ccl6P27784 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ccl6P27784 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ccl6P27784 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccl6P27784 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccl6P27784 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccl6P27784 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccl6P27784 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.35■□□□□ 0.53
Ccl6P27784 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl6P27784 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl6P27784 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl6P27784 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccl6P27784 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccl6P27784 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.32■□□□□ 0.52
Ccl6P27784 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl6P27784 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl6P27784 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ccl6P27784 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl6P27784 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl6P27784 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl6P27784 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccl6P27784 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccl6P27784 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.3■□□□□ 0.52
Ccl6P27784 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl6P27784 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl6P27784 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccl6P27784 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl6P27784 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl6P27784 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl6P27784 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl6P27784 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl6P27784 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl6P27784 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ccl6P27784 Gm30023-201ENSMUST00000197970 889 ntBASIC18.27■□□□□ 0.52
Ccl6P27784 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl6P27784 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl6P27784 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ccl6P27784 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ccl6P27784 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccl6P27784 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Ccl6P27784 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ccl6P27784 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccl6P27784 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl6P27784 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccl6P27784 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.24■□□□□ 0.51
Ccl6P27784 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl6P27784 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl6P27784 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccl6P27784 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl6P27784 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ccl6P27784 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccl6P27784 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccl6P27784 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccl6P27784 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccl6P27784 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms