Protein–RNA interactions for Protein: P09690

Chrnb1, Acetylcholine receptor subunit beta, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb1P09690 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrnb1P09690 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chrnb1P09690 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrnb1P09690 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chrnb1P09690 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.1■□□□□ 0.97
Chrnb1P09690 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Chrnb1P09690 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.09■□□□□ 0.97
Chrnb1P09690 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrnb1P09690 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrnb1P09690 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chrnb1P09690 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrnb1P09690 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chrnb1P09690 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.06■□□□□ 0.96
Chrnb1P09690 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.06■□□□□ 0.96
Chrnb1P09690 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrnb1P09690 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrnb1P09690 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrnb1P09690 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrnb1P09690 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Chrnb1P09690 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrnb1P09690 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrnb1P09690 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrnb1P09690 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrnb1P09690 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrnb1P09690 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chrnb1P09690 Gm16148-201ENSMUST00000119653 893 ntBASIC21.03■□□□□ 0.96
Chrnb1P09690 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrnb1P09690 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrnb1P09690 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chrnb1P09690 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chrnb1P09690 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.01■□□□□ 0.95
Chrnb1P09690 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrnb1P09690 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrnb1P09690 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chrnb1P09690 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrnb1P09690 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrnb1P09690 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chrnb1P09690 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Chrnb1P09690 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrnb1P09690 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21■□□□□ 0.95
Chrnb1P09690 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chrnb1P09690 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrnb1P09690 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrnb1P09690 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chrnb1P09690 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrnb1P09690 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.98■□□□□ 0.95
Chrnb1P09690 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrnb1P09690 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrnb1P09690 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chrnb1P09690 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chrnb1P09690 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrnb1P09690 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrnb1P09690 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chrnb1P09690 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrnb1P09690 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrnb1P09690 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrnb1P09690 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrnb1P09690 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrnb1P09690 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrnb1P09690 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrnb1P09690 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrnb1P09690 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Chrnb1P09690 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chrnb1P09690 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrnb1P09690 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrnb1P09690 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrnb1P09690 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.91■□□□□ 0.94
Chrnb1P09690 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrnb1P09690 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrnb1P09690 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chrnb1P09690 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.9■□□□□ 0.94
Chrnb1P09690 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrnb1P09690 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrnb1P09690 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chrnb1P09690 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chrnb1P09690 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chrnb1P09690 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Chrnb1P09690 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrnb1P09690 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chrnb1P09690 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chrnb1P09690 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chrnb1P09690 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chrnb1P09690 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrnb1P09690 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chrnb1P09690 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrnb1P09690 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chrnb1P09690 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrnb1P09690 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrnb1P09690 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chrnb1P09690 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Chrnb1P09690 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chrnb1P09690 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms