Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
P06328 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P06328 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P06328 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P06328 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P06328 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P06328 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
P06328 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
P06328 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P06328 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P06328 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
P06328 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06328 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06328 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P06328 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06328 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P06328 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.42■□□□□ 0.38
P06328 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06328 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06328 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06328 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06328 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P06328 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06328 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P06328 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06328 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
P06328 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06328 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P06328 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P06328 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06328 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
P06328 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
P06328 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.39■□□□□ 0.38
P06328 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.39■□□□□ 0.37
P06328 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.39■□□□□ 0.37
P06328 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06328 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P06328 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06328 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
P06328 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06328 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06328 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
P06328 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06328 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06328 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P06328 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
P06328 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06328 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06328 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P06328 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P06328 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.34■□□□□ 0.37
P06328 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.34■□□□□ 0.37
P06328 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P06328 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
P06328 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
P06328 Zfp131-205ENSMUST00000223812 663 ntBASIC17.33■□□□□ 0.36
P06328 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.32■□□□□ 0.36
P06328 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.32■□□□□ 0.36
P06328 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.32■□□□□ 0.36
P06328 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P06328 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P06328 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P06328 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
P06328 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
P06328 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06328 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06328 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06328 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.29■□□□□ 0.36
P06328 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.29■□□□□ 0.36
P06328 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
P06328 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06328 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.26■□□□□ 0.35
P06328 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06328 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06328 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06328 Gm9397-201ENSMUST00000200125 605 ntBASIC17.25■□□□□ 0.35
P06328 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06328 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.24■□□□□ 0.35
P06328 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.24■□□□□ 0.35
P06328 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.24■□□□□ 0.35
P06328 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06328 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06328 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.23■□□□□ 0.35
P06328 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P06328 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06328 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
P06328 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.22■□□□□ 0.35
P06328 Gm24970-201ENSMUST00000175582 82 ntBASIC17.22■□□□□ 0.35
P06328 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06328 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06328 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06328 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06328 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06328 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06328 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06328 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.2■□□□□ 0.34
P06328 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
P06328 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06328 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06328 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms