Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04940 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P04940 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
P04940 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
P04940 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
P04940 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P04940 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04940 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04940 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04940 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P04940 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P04940 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
P04940 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
P04940 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.51■□□□□ 0.71
P04940 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04940 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04940 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04940 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04940 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04940 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.49■□□□□ 0.71
P04940 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
P04940 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04940 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04940 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04940 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
P04940 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P04940 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04940 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P04940 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04940 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04940 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
P04940 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04940 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04940 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04940 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
P04940 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04940 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.46■□□□□ 0.71
P04940 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
P04940 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
P04940 Gm30023-201ENSMUST00000197970 889 ntBASIC19.45■□□□□ 0.7
P04940 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.45■□□□□ 0.7
P04940 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P04940 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04940 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04940 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P04940 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04940 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04940 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04940 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
P04940 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04940 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
P04940 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04940 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04940 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04940 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
P04940 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.4■□□□□ 0.7
P04940 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.4■□□□□ 0.7
P04940 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04940 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04940 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04940 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04940 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
P04940 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04940 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04940 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.38■□□□□ 0.69
P04940 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P04940 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04940 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04940 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04940 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04940 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04940 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.37■□□□□ 0.69
P04940 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04940 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P04940 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
P04940 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.36■□□□□ 0.69
P04940 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.36■□□□□ 0.69
P04940 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
P04940 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04940 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04940 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04940 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.35■□□□□ 0.69
P04940 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
P04940 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04940 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04940 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P04940 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P04940 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P04940 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04940 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.32■□□□□ 0.68
P04940 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04940 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04940 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04940 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04940 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P04940 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
P04940 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
P04940 Nkain2-201ENSMUST00000092602 558 ntBASIC19.29■□□□□ 0.68
P04940 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.29■□□□□ 0.68
P04940 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms