Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.26■□□□□ 0.67
P04212 Zfp131-205ENSMUST00000223812 663 ntBASIC19.26■□□□□ 0.67
P04212 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P04212 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04212 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P04212 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
P04212 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04212 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P04212 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P04212 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.22■□□□□ 0.67
P04212 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.22■□□□□ 0.67
P04212 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
P04212 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
P04212 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04212 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
P04212 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P04212 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
P04212 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P04212 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.21■□□□□ 0.67
P04212 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.2■□□□□ 0.66
P04212 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04212 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
P04212 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.2■□□□□ 0.66
P04212 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
P04212 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
P04212 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.18■□□□□ 0.66
P04212 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P04212 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P04212 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.17■□□□□ 0.66
P04212 Gm9397-201ENSMUST00000200125 605 ntBASIC19.16■□□□□ 0.66
P04212 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P04212 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
P04212 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.15■□□□□ 0.66
P04212 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
P04212 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
P04212 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04212 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04212 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.14■□□□□ 0.65
P04212 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.14■□□□□ 0.65
P04212 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.14■□□□□ 0.65
P04212 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P04212 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04212 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
P04212 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
P04212 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04212 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
P04212 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04212 Gm24970-201ENSMUST00000175582 82 ntBASIC19.12■□□□□ 0.65
P04212 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P04212 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04212 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04212 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
P04212 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P04212 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P04212 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
P04212 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P04212 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04212 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04212 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.09■□□□□ 0.65
P04212 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
P04212 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
P04212 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04212 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04212 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P04212 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P04212 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
P04212 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P04212 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P04212 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.07■□□□□ 0.64
P04212 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
P04212 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.07■□□□□ 0.64
P04212 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.06■□□□□ 0.64
P04212 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
P04212 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.06■□□□□ 0.64
P04212 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P04212 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P04212 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04212 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04212 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P04212 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04212 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04212 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.05■□□□□ 0.64
P04212 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04212 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P04212 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
P04212 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
P04212 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P04212 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
P04212 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.04■□□□□ 0.64
P04212 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P04212 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P04212 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
P04212 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P04212 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.03■□□□□ 0.64
P04212 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P04212 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P04212 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
P04212 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P04212 Gm45855-201ENSMUST00000212546 880 ntBASIC19.02■□□□□ 0.64
P04212 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms