Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CfdP03953 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CfdP03953 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CfdP03953 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CfdP03953 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CfdP03953 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CfdP03953 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CfdP03953 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CfdP03953 Il17rd-202ENSMUST00000223942 2186 ntBASIC20■□□□□ 0.79
CfdP03953 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20■□□□□ 0.79
CfdP03953 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CfdP03953 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CfdP03953 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CfdP03953 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CfdP03953 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CfdP03953 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CfdP03953 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CfdP03953 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CfdP03953 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CfdP03953 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CfdP03953 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CfdP03953 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CfdP03953 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CfdP03953 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CfdP03953 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CfdP03953 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CfdP03953 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CfdP03953 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CfdP03953 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CfdP03953 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CfdP03953 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CfdP03953 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CfdP03953 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CfdP03953 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CfdP03953 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CfdP03953 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CfdP03953 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CfdP03953 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CfdP03953 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CfdP03953 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CfdP03953 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CfdP03953 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CfdP03953 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CfdP03953 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CfdP03953 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.88■□□□□ 0.77
CfdP03953 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CfdP03953 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CfdP03953 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CfdP03953 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CfdP03953 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CfdP03953 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CfdP03953 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CfdP03953 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CfdP03953 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CfdP03953 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CfdP03953 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CfdP03953 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CfdP03953 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CfdP03953 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.83■□□□□ 0.77
CfdP03953 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CfdP03953 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CfdP03953 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CfdP03953 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CfdP03953 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CfdP03953 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CfdP03953 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CfdP03953 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.81■□□□□ 0.76
CfdP03953 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CfdP03953 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CfdP03953 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CfdP03953 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CfdP03953 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.8■□□□□ 0.76
CfdP03953 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CfdP03953 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CfdP03953 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CfdP03953 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CfdP03953 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CfdP03953 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CfdP03953 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CfdP03953 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CfdP03953 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CfdP03953 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.78■□□□□ 0.76
CfdP03953 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CfdP03953 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CfdP03953 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CfdP03953 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CfdP03953 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CfdP03953 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CfdP03953 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.77■□□□□ 0.76
CfdP03953 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CfdP03953 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CfdP03953 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CfdP03953 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CfdP03953 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CfdP03953 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CfdP03953 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CfdP03953 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CfdP03953 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CfdP03953 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CfdP03953 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms