Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Best1O88870 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Best1O88870 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Best1O88870 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23,47■■□□□ 1,35
Best1O88870 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23,46■■□□□ 1,35
Best1O88870 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23,46■■□□□ 1,35
Best1O88870 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23,45■■□□□ 1,34
Best1O88870 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23,45■■□□□ 1,34
Best1O88870 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23,44■■□□□ 1,34
Best1O88870 Gm9905-201ENSMUST00000065740 1845 ntBASIC23,44■■□□□ 1,34
Best1O88870 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23,44■■□□□ 1,34
Best1O88870 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23,43■■□□□ 1,34
Best1O88870 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23,43■■□□□ 1,34
Best1O88870 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23,43■■□□□ 1,34
Best1O88870 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23,42■■□□□ 1,34
Best1O88870 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23,42■■□□□ 1,34
Best1O88870 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23,41■■□□□ 1,34
Best1O88870 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23,41■■□□□ 1,34
Best1O88870 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Best1O88870 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Best1O88870 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23,4■■□□□ 1,34
Best1O88870 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23,4■■□□□ 1,34
Best1O88870 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,33
Best1O88870 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23,39■■□□□ 1,33
Best1O88870 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,33
Best1O88870 Gm5987-201ENSMUST00000196433 1151 ntBASIC23,38■■□□□ 1,33
Best1O88870 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Best1O88870 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23,37■■□□□ 1,33
Best1O88870 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23,36■■□□□ 1,33
Best1O88870 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Best1O88870 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Best1O88870 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23,35■■□□□ 1,33
Best1O88870 Gm6206-201ENSMUST00000133472 2199 ntBASIC23,34■■□□□ 1,33
Best1O88870 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23,34■■□□□ 1,33
Best1O88870 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23,34■■□□□ 1,33
Best1O88870 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Best1O88870 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,33
Best1O88870 Gm11599-201ENSMUST00000118720 878 ntBASIC23,33■■□□□ 1,33
Best1O88870 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23,33■■□□□ 1,33
Best1O88870 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,32
Best1O88870 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,32
Best1O88870 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23,32■■□□□ 1,32
Best1O88870 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23,32■■□□□ 1,32
Best1O88870 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23,32■■□□□ 1,32
Best1O88870 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23,32■■□□□ 1,32
Best1O88870 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23,31■■□□□ 1,32
Best1O88870 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23,3■■□□□ 1,32
Best1O88870 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23,29■■□□□ 1,32
Best1O88870 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23,29■■□□□ 1,32
Best1O88870 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23,29■■□□□ 1,32
Best1O88870 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23,29■■□□□ 1,32
Best1O88870 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23,29■■□□□ 1,32
Best1O88870 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23,28■■□□□ 1,32
Best1O88870 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23,27■■□□□ 1,32
Best1O88870 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23,27■■□□□ 1,32
Best1O88870 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23,26■■□□□ 1,31
Best1O88870 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23,26■■□□□ 1,31
Best1O88870 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23,25■■□□□ 1,31
Best1O88870 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23,25■■□□□ 1,31
Best1O88870 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23,25■■□□□ 1,31
Best1O88870 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23,25■■□□□ 1,31
Best1O88870 Particl-201ENSMUST00000205370 1560 ntBASIC23,24■■□□□ 1,31
Best1O88870 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23,24■■□□□ 1,31
Best1O88870 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23,23■■□□□ 1,31
Best1O88870 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23,23■■□□□ 1,31
Best1O88870 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23,22■■□□□ 1,31
Best1O88870 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23,22■■□□□ 1,31
Best1O88870 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23,22■■□□□ 1,31
Best1O88870 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23,21■■□□□ 1,31
Best1O88870 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23,21■■□□□ 1,31
Best1O88870 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23,2■■□□□ 1,3
Best1O88870 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23,2■■□□□ 1,3
Best1O88870 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23,2■■□□□ 1,3
Best1O88870 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23,19■■□□□ 1,3
Best1O88870 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23,18■■□□□ 1,3
Best1O88870 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23,17■■□□□ 1,3
Best1O88870 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23,17■■□□□ 1,3
Best1O88870 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23,16■■□□□ 1,3
Best1O88870 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23,16■■□□□ 1,3
Best1O88870 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23,15■■□□□ 1,3
Best1O88870 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23,14■■□□□ 1,29
Best1O88870 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23,14■■□□□ 1,29
Best1O88870 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23,14■■□□□ 1,29
Best1O88870 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23,13■■□□□ 1,29
Best1O88870 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23,12■■□□□ 1,29
Best1O88870 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23,12■■□□□ 1,29
Best1O88870 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
Best1O88870 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
Best1O88870 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23,11■■□□□ 1,29
Best1O88870 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23,1■■□□□ 1,29
Best1O88870 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23,1■■□□□ 1,29
Best1O88870 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Best1O88870 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23,09■■□□□ 1,29
Best1O88870 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23,09■■□□□ 1,29
Best1O88870 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23,09■■□□□ 1,29
Best1O88870 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,29
Best1O88870 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Best1O88870 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23,07■■□□□ 1,28
Best1O88870 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23,06■■□□□ 1,28
Best1O88870 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23,06■■□□□ 1,28
Retrieved 100 of 76,532 protein–RNA pairs in 65,1 ms