Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.38■■□□□ 1.65
Psmc3O88685 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Psmc3O88685 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Psmc3O88685 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Psmc3O88685 Gm30023-201ENSMUST00000197970 889 ntBASIC25.36■■□□□ 1.65
Psmc3O88685 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Psmc3O88685 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.35■■□□□ 1.65
Psmc3O88685 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Psmc3O88685 Cap2-205ENSMUST00000225824 1634 ntBASIC25.34■■□□□ 1.65
Psmc3O88685 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Psmc3O88685 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Psmc3O88685 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Psmc3O88685 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Psmc3O88685 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Psmc3O88685 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Psmc3O88685 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Psmc3O88685 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Psmc3O88685 Particl-201ENSMUST00000205370 1560 ntBASIC25.31■■□□□ 1.64
Psmc3O88685 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Psmc3O88685 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Psmc3O88685 Zxda-201ENSMUST00000117281 2621 ntBASIC25.29■■□□□ 1.64
Psmc3O88685 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Psmc3O88685 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Psmc3O88685 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.28■■□□□ 1.64
Psmc3O88685 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Psmc3O88685 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.27■■□□□ 1.64
Psmc3O88685 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Psmc3O88685 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Psmc3O88685 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.26■■□□□ 1.63
Psmc3O88685 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Psmc3O88685 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Psmc3O88685 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Psmc3O88685 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Psmc3O88685 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Psmc3O88685 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.25■■□□□ 1.63
Psmc3O88685 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.25■■□□□ 1.63
Psmc3O88685 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Psmc3O88685 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Psmc3O88685 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Psmc3O88685 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Psmc3O88685 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Psmc3O88685 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.21■■□□□ 1.63
Psmc3O88685 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.21■■□□□ 1.63
Psmc3O88685 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Psmc3O88685 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Psmc3O88685 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Psmc3O88685 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.19■■□□□ 1.62
Psmc3O88685 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Psmc3O88685 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Psmc3O88685 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Psmc3O88685 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Psmc3O88685 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Psmc3O88685 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Psmc3O88685 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Psmc3O88685 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Psmc3O88685 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.14■■□□□ 1.62
Psmc3O88685 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Psmc3O88685 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Psmc3O88685 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Psmc3O88685 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.13■■□□□ 1.61
Psmc3O88685 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Psmc3O88685 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Psmc3O88685 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Psmc3O88685 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Psmc3O88685 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Psmc3O88685 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Psmc3O88685 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Psmc3O88685 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Psmc3O88685 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Psmc3O88685 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Psmc3O88685 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Psmc3O88685 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.08■■□□□ 1.61
Psmc3O88685 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Psmc3O88685 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Psmc3O88685 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.07■■□□□ 1.6
Psmc3O88685 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Psmc3O88685 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.07■■□□□ 1.6
Psmc3O88685 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.06■■□□□ 1.6
Psmc3O88685 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Psmc3O88685 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Psmc3O88685 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.05■■□□□ 1.6
Psmc3O88685 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Psmc3O88685 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Psmc3O88685 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Psmc3O88685 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Psmc3O88685 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Psmc3O88685 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Psmc3O88685 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Psmc3O88685 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Psmc3O88685 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Psmc3O88685 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.02■■□□□ 1.6
Psmc3O88685 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Psmc3O88685 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
Psmc3O88685 Scarna2-201ENSMUST00000157560 414 ntBASIC25.02■■□□□ 1.6
Psmc3O88685 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Psmc3O88685 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Psmc3O88685 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.01■■□□□ 1.59
Psmc3O88685 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Psmc3O88685 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Psmc3O88685 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms