Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cacna1hO88427 Gm16437-201ENSMUST00000025669 507 ntBASIC24.44■■□□□ 1.5
Cacna1hO88427 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cacna1hO88427 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.44■■□□□ 1.5
Cacna1hO88427 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.42■■□□□ 1.5
Cacna1hO88427 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Cacna1hO88427 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cacna1hO88427 Gm15546-201ENSMUST00000122095 826 ntBASIC24.42■■□□□ 1.5
Cacna1hO88427 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cacna1hO88427 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cacna1hO88427 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.4■■□□□ 1.5
Cacna1hO88427 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cacna1hO88427 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cacna1hO88427 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna1hO88427 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.38■■□□□ 1.49
Cacna1hO88427 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna1hO88427 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna1hO88427 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Cacna1hO88427 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cacna1hO88427 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cacna1hO88427 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Cacna1hO88427 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.36■■□□□ 1.49
Cacna1hO88427 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.35■■□□□ 1.49
Cacna1hO88427 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Cacna1hO88427 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cacna1hO88427 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Cacna1hO88427 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cacna1hO88427 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cacna1hO88427 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cacna1hO88427 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cacna1hO88427 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cacna1hO88427 Gm14523-201ENSMUST00000117260 558 ntBASIC24.28■■□□□ 1.48
Cacna1hO88427 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cacna1hO88427 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cacna1hO88427 Gm5921-201ENSMUST00000075898 882 ntBASIC24.28■■□□□ 1.48
Cacna1hO88427 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cacna1hO88427 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.25■■□□□ 1.47
Cacna1hO88427 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.25■■□□□ 1.47
Cacna1hO88427 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.25■■□□□ 1.47
Cacna1hO88427 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cacna1hO88427 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cacna1hO88427 Particl-201ENSMUST00000205370 1560 ntBASIC24.25■■□□□ 1.47
Cacna1hO88427 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cacna1hO88427 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.23■■□□□ 1.47
Cacna1hO88427 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.23■■□□□ 1.47
Cacna1hO88427 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacna1hO88427 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cacna1hO88427 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.22■■□□□ 1.47
Cacna1hO88427 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cacna1hO88427 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.21■■□□□ 1.47
Cacna1hO88427 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cacna1hO88427 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.2■■□□□ 1.46
Cacna1hO88427 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.2■■□□□ 1.46
Cacna1hO88427 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cacna1hO88427 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cacna1hO88427 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.18■■□□□ 1.46
Cacna1hO88427 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cacna1hO88427 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Cacna1hO88427 Gm27502-201ENSMUST00000183495 199 ntBASIC24.18■■□□□ 1.46
Cacna1hO88427 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cacna1hO88427 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cacna1hO88427 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.17■■□□□ 1.46
Cacna1hO88427 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cacna1hO88427 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cacna1hO88427 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cacna1hO88427 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Cacna1hO88427 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.14■■□□□ 1.46
Cacna1hO88427 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cacna1hO88427 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.13■■□□□ 1.45
Cacna1hO88427 Gm10420-201ENSMUST00000121713 882 ntBASIC24.12■■□□□ 1.45
Cacna1hO88427 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cacna1hO88427 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Cacna1hO88427 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cacna1hO88427 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cacna1hO88427 Gm45364-201ENSMUST00000210883 159 ntBASIC24.09■■□□□ 1.45
Cacna1hO88427 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cacna1hO88427 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cacna1hO88427 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cacna1hO88427 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Cacna1hO88427 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cacna1hO88427 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cacna1hO88427 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Cacna1hO88427 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cacna1hO88427 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cacna1hO88427 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.07■■□□□ 1.44
Cacna1hO88427 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.07■■□□□ 1.44
Cacna1hO88427 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cacna1hO88427 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cacna1hO88427 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cacna1hO88427 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.06■■□□□ 1.44
Cacna1hO88427 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Cacna1hO88427 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cacna1hO88427 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.05■■□□□ 1.44
Cacna1hO88427 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cacna1hO88427 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cacna1hO88427 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Cacna1hO88427 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Cacna1hO88427 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cacna1hO88427 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cacna1hO88427 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms