Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.86■■■□□ 2.53
Tnnt1O88346 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Tnnt1O88346 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Tnnt1O88346 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tnnt1O88346 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tnnt1O88346 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Tnnt1O88346 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Tnnt1O88346 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Tnnt1O88346 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.79■■■□□ 2.52
Tnnt1O88346 Gm11599-201ENSMUST00000118720 878 ntBASIC30.79■■■□□ 2.52
Tnnt1O88346 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Tnnt1O88346 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.78■■■□□ 2.52
Tnnt1O88346 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Tnnt1O88346 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.77■■■□□ 2.52
Tnnt1O88346 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Tnnt1O88346 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Tnnt1O88346 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tnnt1O88346 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tnnt1O88346 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.75■■■□□ 2.51
Tnnt1O88346 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tnnt1O88346 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.74■■■□□ 2.51
Tnnt1O88346 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tnnt1O88346 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tnnt1O88346 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Tnnt1O88346 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Tnnt1O88346 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.7■■■□□ 2.51
Tnnt1O88346 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Tnnt1O88346 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Tnnt1O88346 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Tnnt1O88346 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Tnnt1O88346 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tnnt1O88346 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tnnt1O88346 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Tnnt1O88346 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Tnnt1O88346 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.65■■■□□ 2.5
Tnnt1O88346 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Tnnt1O88346 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Tnnt1O88346 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
Tnnt1O88346 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.62■■■□□ 2.49
Tnnt1O88346 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.61■■■□□ 2.49
Tnnt1O88346 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tnnt1O88346 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.59■■■□□ 2.49
Tnnt1O88346 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Tnnt1O88346 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tnnt1O88346 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.59■■■□□ 2.49
Tnnt1O88346 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Tnnt1O88346 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Tnnt1O88346 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Tnnt1O88346 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tnnt1O88346 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tnnt1O88346 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tnnt1O88346 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
Tnnt1O88346 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Tnnt1O88346 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
Tnnt1O88346 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Tnnt1O88346 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.53■■■□□ 2.48
Tnnt1O88346 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.53■■■□□ 2.48
Tnnt1O88346 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tnnt1O88346 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tnnt1O88346 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Tnnt1O88346 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Tnnt1O88346 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.5■■■□□ 2.47
Tnnt1O88346 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Tnnt1O88346 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.49■■■□□ 2.47
Tnnt1O88346 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.49■■■□□ 2.47
Tnnt1O88346 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Tnnt1O88346 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Tnnt1O88346 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Tnnt1O88346 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.48■■■□□ 2.47
Tnnt1O88346 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Tnnt1O88346 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Tnnt1O88346 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Tnnt1O88346 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.47■■■□□ 2.47
Tnnt1O88346 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Tnnt1O88346 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.47■■■□□ 2.47
Tnnt1O88346 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.47■■■□□ 2.47
Tnnt1O88346 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Tnnt1O88346 Particl-201ENSMUST00000205370 1560 ntBASIC30.46■■■□□ 2.47
Tnnt1O88346 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.45■■■□□ 2.47
Tnnt1O88346 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Tnnt1O88346 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Tnnt1O88346 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Tnnt1O88346 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Tnnt1O88346 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.44■■■□□ 2.46
Tnnt1O88346 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Tnnt1O88346 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Tnnt1O88346 Amer2-203ENSMUST00000225247 2662 ntBASIC30.42■■■□□ 2.46
Tnnt1O88346 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Tnnt1O88346 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Tnnt1O88346 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Tnnt1O88346 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Tnnt1O88346 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Tnnt1O88346 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Tnnt1O88346 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
Tnnt1O88346 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Tnnt1O88346 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Tnnt1O88346 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.38■■■□□ 2.45
Tnnt1O88346 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.38■■■□□ 2.45
Tnnt1O88346 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Tnnt1O88346 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms