Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.86■■■□□ 2.53
Tnnt1O88346 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Tnnt1O88346 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Tnnt1O88346 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tnnt1O88346 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tnnt1O88346 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Tnnt1O88346 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Tnnt1O88346 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Tnnt1O88346 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.79■■■□□ 2.52
Tnnt1O88346 Gm11599-201ENSMUST00000118720 878 ntBASIC30.79■■■□□ 2.52
Tnnt1O88346 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Tnnt1O88346 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.78■■■□□ 2.52
Tnnt1O88346 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Tnnt1O88346 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.77■■■□□ 2.52
Tnnt1O88346 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Tnnt1O88346 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Tnnt1O88346 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tnnt1O88346 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tnnt1O88346 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.75■■■□□ 2.51
Tnnt1O88346 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tnnt1O88346 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.74■■■□□ 2.51
Tnnt1O88346 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tnnt1O88346 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tnnt1O88346 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Tnnt1O88346 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Tnnt1O88346 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.7■■■□□ 2.51
Tnnt1O88346 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Tnnt1O88346 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Tnnt1O88346 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Tnnt1O88346 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Tnnt1O88346 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tnnt1O88346 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tnnt1O88346 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Tnnt1O88346 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Tnnt1O88346 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.65■■■□□ 2.5
Tnnt1O88346 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Tnnt1O88346 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Tnnt1O88346 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
Tnnt1O88346 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.62■■■□□ 2.49
Tnnt1O88346 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.61■■■□□ 2.49
Tnnt1O88346 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tnnt1O88346 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.59■■■□□ 2.49
Tnnt1O88346 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Tnnt1O88346 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tnnt1O88346 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.59■■■□□ 2.49
Tnnt1O88346 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Tnnt1O88346 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Tnnt1O88346 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Tnnt1O88346 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tnnt1O88346 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tnnt1O88346 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tnnt1O88346 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
Tnnt1O88346 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Tnnt1O88346 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
Tnnt1O88346 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Tnnt1O88346 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.53■■■□□ 2.48
Tnnt1O88346 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.53■■■□□ 2.48
Tnnt1O88346 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tnnt1O88346 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tnnt1O88346 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Tnnt1O88346 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Tnnt1O88346 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.5■■■□□ 2.47
Tnnt1O88346 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Tnnt1O88346 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.49■■■□□ 2.47
Tnnt1O88346 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.49■■■□□ 2.47
Tnnt1O88346 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Tnnt1O88346 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Tnnt1O88346 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Tnnt1O88346 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.48■■■□□ 2.47
Tnnt1O88346 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Tnnt1O88346 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Tnnt1O88346 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Tnnt1O88346 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.47■■■□□ 2.47
Tnnt1O88346 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Tnnt1O88346 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.47■■■□□ 2.47
Tnnt1O88346 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.47■■■□□ 2.47
Tnnt1O88346 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Tnnt1O88346 Particl-201ENSMUST00000205370 1560 ntBASIC30.46■■■□□ 2.47
Tnnt1O88346 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.45■■■□□ 2.47
Tnnt1O88346 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Tnnt1O88346 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Tnnt1O88346 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Tnnt1O88346 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Tnnt1O88346 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.44■■■□□ 2.46
Tnnt1O88346 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Tnnt1O88346 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Tnnt1O88346 Amer2-203ENSMUST00000225247 2662 ntBASIC30.42■■■□□ 2.46
Tnnt1O88346 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Tnnt1O88346 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Tnnt1O88346 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Tnnt1O88346 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Tnnt1O88346 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Tnnt1O88346 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Tnnt1O88346 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
Tnnt1O88346 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Tnnt1O88346 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Tnnt1O88346 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.38■■■□□ 2.45
Tnnt1O88346 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.38■■■□□ 2.45
Tnnt1O88346 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Tnnt1O88346 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms