Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm10226O88253 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm10226O88253 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm10226O88253 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm10226O88253 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm10226O88253 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm10226O88253 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.72■□□□□ 0.59
Gm10226O88253 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
Gm10226O88253 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Gm10226O88253 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gm10226O88253 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm10226O88253 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm10226O88253 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Gm10226O88253 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm10226O88253 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gm10226O88253 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm10226O88253 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm10226O88253 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm10226O88253 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm10226O88253 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.68■□□□□ 0.58
Gm10226O88253 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm10226O88253 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm10226O88253 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm10226O88253 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm10226O88253 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm10226O88253 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm10226O88253 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm10226O88253 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm10226O88253 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm10226O88253 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm10226O88253 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm10226O88253 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.64■□□□□ 0.57
Gm10226O88253 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.64■□□□□ 0.57
Gm10226O88253 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm10226O88253 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm10226O88253 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm10226O88253 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Gm10226O88253 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm10226O88253 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm10226O88253 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.62■□□□□ 0.57
Gm10226O88253 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm10226O88253 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Gm10226O88253 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm10226O88253 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm10226O88253 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.6■□□□□ 0.57
Gm10226O88253 Gm7432-201ENSMUST00000210343 879 ntBASIC18.6■□□□□ 0.57
Gm10226O88253 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm10226O88253 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10226O88253 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10226O88253 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gm10226O88253 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Gm10226O88253 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10226O88253 Amer2-203ENSMUST00000225247 2662 ntBASIC18.58■□□□□ 0.57
Gm10226O88253 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm10226O88253 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.58■□□□□ 0.56
Gm10226O88253 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm10226O88253 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm10226O88253 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm10226O88253 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Gm10226O88253 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm10226O88253 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10226O88253 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10226O88253 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10226O88253 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm10226O88253 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10226O88253 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10226O88253 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.55■□□□□ 0.56
Gm10226O88253 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10226O88253 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10226O88253 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10226O88253 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.54■□□□□ 0.56
Gm10226O88253 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm10226O88253 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm10226O88253 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
Gm10226O88253 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Gm10226O88253 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.52■□□□□ 0.56
Gm10226O88253 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Gm10226O88253 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.52■□□□□ 0.56
Gm10226O88253 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm10226O88253 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm10226O88253 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gm10226O88253 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm10226O88253 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.51■□□□□ 0.55
Gm10226O88253 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm10226O88253 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm10226O88253 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm10226O88253 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm10226O88253 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Gm10226O88253 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm10226O88253 Particl-201ENSMUST00000205370 1560 ntBASIC18.5■□□□□ 0.55
Gm10226O88253 Gm11599-201ENSMUST00000118720 878 ntBASIC18.49■□□□□ 0.55
Gm10226O88253 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.48■□□□□ 0.55
Gm10226O88253 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm10226O88253 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Gm10226O88253 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.47■□□□□ 0.55
Gm10226O88253 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm10226O88253 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Gm10226O88253 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.46■□□□□ 0.55
Gm10226O88253 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm10226O88253 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms