Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sptlc1O35704 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sptlc1O35704 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sptlc1O35704 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sptlc1O35704 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.56■■□□□ 1.84
Sptlc1O35704 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.56■■□□□ 1.84
Sptlc1O35704 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sptlc1O35704 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sptlc1O35704 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Sptlc1O35704 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sptlc1O35704 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sptlc1O35704 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Sptlc1O35704 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.53■■□□□ 1.84
Sptlc1O35704 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sptlc1O35704 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.52■■□□□ 1.84
Sptlc1O35704 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sptlc1O35704 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sptlc1O35704 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sptlc1O35704 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Sptlc1O35704 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sptlc1O35704 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Sptlc1O35704 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Sptlc1O35704 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Sptlc1O35704 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Sptlc1O35704 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Sptlc1O35704 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.49■■□□□ 1.83
Sptlc1O35704 Gm11175-201ENSMUST00000116172 543 ntBASIC26.47■■□□□ 1.83
Sptlc1O35704 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.47■■□□□ 1.83
Sptlc1O35704 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sptlc1O35704 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sptlc1O35704 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Sptlc1O35704 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Sptlc1O35704 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sptlc1O35704 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sptlc1O35704 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.43■■□□□ 1.82
Sptlc1O35704 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sptlc1O35704 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Sptlc1O35704 Particl-201ENSMUST00000205370 1560 ntBASIC26.41■■□□□ 1.82
Sptlc1O35704 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Sptlc1O35704 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.4■■□□□ 1.82
Sptlc1O35704 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sptlc1O35704 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sptlc1O35704 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Sptlc1O35704 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Sptlc1O35704 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sptlc1O35704 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sptlc1O35704 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Sptlc1O35704 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Sptlc1O35704 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.38■■□□□ 1.81
Sptlc1O35704 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Sptlc1O35704 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.37■■□□□ 1.81
Sptlc1O35704 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Sptlc1O35704 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sptlc1O35704 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sptlc1O35704 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Sptlc1O35704 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.35■■□□□ 1.81
Sptlc1O35704 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
Sptlc1O35704 Mir6538-201ENSMUST00000183713 110 ntBASIC26.33■■□□□ 1.81
Sptlc1O35704 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sptlc1O35704 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sptlc1O35704 Zxda-201ENSMUST00000117281 2621 ntBASIC26.31■■□□□ 1.8
Sptlc1O35704 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Sptlc1O35704 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Sptlc1O35704 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Sptlc1O35704 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Sptlc1O35704 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sptlc1O35704 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Sptlc1O35704 Gm6311-201ENSMUST00000073790 878 ntBASIC26.29■■□□□ 1.8
Sptlc1O35704 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sptlc1O35704 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Sptlc1O35704 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sptlc1O35704 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Sptlc1O35704 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sptlc1O35704 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.26■■□□□ 1.79
Sptlc1O35704 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.26■■□□□ 1.79
Sptlc1O35704 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sptlc1O35704 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.25■■□□□ 1.79
Sptlc1O35704 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Sptlc1O35704 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Sptlc1O35704 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.22■■□□□ 1.79
Sptlc1O35704 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.21■■□□□ 1.79
Sptlc1O35704 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Sptlc1O35704 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Sptlc1O35704 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Sptlc1O35704 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sptlc1O35704 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sptlc1O35704 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.17■■□□□ 1.78
Sptlc1O35704 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sptlc1O35704 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sptlc1O35704 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Sptlc1O35704 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sptlc1O35704 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Sptlc1O35704 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Sptlc1O35704 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sptlc1O35704 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sptlc1O35704 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Sptlc1O35704 Cap2-205ENSMUST00000225824 1634 ntBASIC26.13■■□□□ 1.77
Sptlc1O35704 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Sptlc1O35704 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sptlc1O35704 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms