Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Abca4O35600 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Abca4O35600 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.66■■□□□ 1.38
Abca4O35600 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Abca4O35600 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.65■■□□□ 1.38
Abca4O35600 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Abca4O35600 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Abca4O35600 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Abca4O35600 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Abca4O35600 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.6■■□□□ 1.37
Abca4O35600 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Abca4O35600 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Abca4O35600 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.58■■□□□ 1.37
Abca4O35600 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Abca4O35600 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Abca4O35600 Gm5921-201ENSMUST00000075898 882 ntBASIC23.56■■□□□ 1.36
Abca4O35600 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Abca4O35600 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.56■■□□□ 1.36
Abca4O35600 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Abca4O35600 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Abca4O35600 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Abca4O35600 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.54■■□□□ 1.36
Abca4O35600 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.53■■□□□ 1.36
Abca4O35600 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Abca4O35600 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.5■■□□□ 1.35
Abca4O35600 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.5■■□□□ 1.35
Abca4O35600 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Abca4O35600 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Abca4O35600 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.49■■□□□ 1.35
Abca4O35600 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Abca4O35600 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Abca4O35600 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.48■■□□□ 1.35
Abca4O35600 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Abca4O35600 Gm27502-201ENSMUST00000183495 199 ntBASIC23.48■■□□□ 1.35
Abca4O35600 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.46■■□□□ 1.35
Abca4O35600 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.46■■□□□ 1.35
Abca4O35600 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.46■■□□□ 1.35
Abca4O35600 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Abca4O35600 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Abca4O35600 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Abca4O35600 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Abca4O35600 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Abca4O35600 Gm14523-201ENSMUST00000117260 558 ntBASIC23.45■■□□□ 1.34
Abca4O35600 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Abca4O35600 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.45■■□□□ 1.34
Abca4O35600 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.45■■□□□ 1.34
Abca4O35600 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.45■■□□□ 1.34
Abca4O35600 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Abca4O35600 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Abca4O35600 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.44■■□□□ 1.34
Abca4O35600 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Abca4O35600 Particl-201ENSMUST00000205370 1560 ntBASIC23.44■■□□□ 1.34
Abca4O35600 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Abca4O35600 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Abca4O35600 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Abca4O35600 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Abca4O35600 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.42■■□□□ 1.34
Abca4O35600 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Abca4O35600 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Abca4O35600 Gm10420-201ENSMUST00000121713 882 ntBASIC23.41■■□□□ 1.34
Abca4O35600 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Abca4O35600 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Abca4O35600 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.4■■□□□ 1.34
Abca4O35600 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Abca4O35600 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Abca4O35600 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Abca4O35600 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Abca4O35600 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Abca4O35600 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Abca4O35600 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.37■■□□□ 1.33
Abca4O35600 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Abca4O35600 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Abca4O35600 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Abca4O35600 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Abca4O35600 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Abca4O35600 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Abca4O35600 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.35■■□□□ 1.33
Abca4O35600 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.34■■□□□ 1.33
Abca4O35600 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Abca4O35600 Gm45364-201ENSMUST00000210883 159 ntBASIC23.33■■□□□ 1.33
Abca4O35600 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Abca4O35600 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Abca4O35600 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Abca4O35600 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.32■■□□□ 1.32
Abca4O35600 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Abca4O35600 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Abca4O35600 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.31■■□□□ 1.32
Abca4O35600 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
Abca4O35600 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.3■■□□□ 1.32
Abca4O35600 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Abca4O35600 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Abca4O35600 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.29■■□□□ 1.32
Abca4O35600 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Abca4O35600 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Abca4O35600 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Abca4O35600 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Abca4O35600 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Abca4O35600 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Abca4O35600 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Abca4O35600 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms