Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Gm10553J3QPF1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm10553J3QPF1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm10553J3QPF1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.31■□□□□ 0.52
Gm10553J3QPF1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Gm10553J3QPF1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Gm10553J3QPF1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Gm10553J3QPF1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm10553J3QPF1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.3■□□□□ 0.52
Gm10553J3QPF1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm10553J3QPF1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm10553J3QPF1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gm10553J3QPF1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm10553J3QPF1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm10553J3QPF1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm10553J3QPF1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm10553J3QPF1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.26■□□□□ 0.51
Gm10553J3QPF1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm10553J3QPF1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm10553J3QPF1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm10553J3QPF1 Gm30023-201ENSMUST00000197970 889 ntBASIC18.25■□□□□ 0.51
Gm10553J3QPF1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm10553J3QPF1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.24■□□□□ 0.51
Gm10553J3QPF1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm10553J3QPF1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm10553J3QPF1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm10553J3QPF1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm10553J3QPF1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm10553J3QPF1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm10553J3QPF1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm10553J3QPF1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm10553J3QPF1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.21■□□□□ 0.51
Gm10553J3QPF1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm10553J3QPF1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm10553J3QPF1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm10553J3QPF1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm10553J3QPF1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm10553J3QPF1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm10553J3QPF1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm10553J3QPF1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10553J3QPF1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm10553J3QPF1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm10553J3QPF1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm10553J3QPF1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Gm10553J3QPF1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gm10553J3QPF1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm10553J3QPF1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm10553J3QPF1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm10553J3QPF1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm10553J3QPF1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm10553J3QPF1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10553J3QPF1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10553J3QPF1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10553J3QPF1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10553J3QPF1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10553J3QPF1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10553J3QPF1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm10553J3QPF1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.13■□□□□ 0.49
Gm10553J3QPF1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm10553J3QPF1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.13■□□□□ 0.49
Gm10553J3QPF1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm10553J3QPF1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gm10553J3QPF1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10553J3QPF1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10553J3QPF1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.12■□□□□ 0.49
Gm10553J3QPF1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Gm10553J3QPF1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Gm10553J3QPF1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10553J3QPF1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10553J3QPF1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10553J3QPF1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Gm10553J3QPF1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10553J3QPF1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10553J3QPF1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10553J3QPF1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10553J3QPF1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10553J3QPF1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.08■□□□□ 0.49
Gm10553J3QPF1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Gm10553J3QPF1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10553J3QPF1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10553J3QPF1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10553J3QPF1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10553J3QPF1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm10553J3QPF1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10553J3QPF1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm10553J3QPF1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10553J3QPF1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10553J3QPF1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10553J3QPF1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10553J3QPF1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.05■□□□□ 0.48
Gm10553J3QPF1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10553J3QPF1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Gm10553J3QPF1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10553J3QPF1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10553J3QPF1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10553J3QPF1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10553J3QPF1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10553J3QPF1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10553J3QPF1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.03■□□□□ 0.48
Gm10553J3QPF1 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms