Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc188F6WEU2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc188F6WEU2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc188F6WEU2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc188F6WEU2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ccdc188F6WEU2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.49■■□□□ 1.67
Ccdc188F6WEU2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ccdc188F6WEU2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ccdc188F6WEU2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ccdc188F6WEU2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.46■■□□□ 1.67
Ccdc188F6WEU2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ccdc188F6WEU2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Ccdc188F6WEU2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ccdc188F6WEU2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ccdc188F6WEU2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ccdc188F6WEU2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Ccdc188F6WEU2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Ccdc188F6WEU2 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.41■■□□□ 1.66
Ccdc188F6WEU2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.39■■□□□ 1.66
Ccdc188F6WEU2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ccdc188F6WEU2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Ccdc188F6WEU2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.38■■□□□ 1.65
Ccdc188F6WEU2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ccdc188F6WEU2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Ccdc188F6WEU2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ccdc188F6WEU2 Particl-201ENSMUST00000205370 1560 ntBASIC25.36■■□□□ 1.65
Ccdc188F6WEU2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ccdc188F6WEU2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ccdc188F6WEU2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ccdc188F6WEU2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ccdc188F6WEU2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Ccdc188F6WEU2 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.32■■□□□ 1.64
Ccdc188F6WEU2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.31■■□□□ 1.64
Ccdc188F6WEU2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.3■■□□□ 1.64
Ccdc188F6WEU2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.3■■□□□ 1.64
Ccdc188F6WEU2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc188F6WEU2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc188F6WEU2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc188F6WEU2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc188F6WEU2 Gm15546-201ENSMUST00000122095 826 ntBASIC25.28■■□□□ 1.64
Ccdc188F6WEU2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.28■■□□□ 1.64
Ccdc188F6WEU2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ccdc188F6WEU2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.27■■□□□ 1.64
Ccdc188F6WEU2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ccdc188F6WEU2 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.26■■□□□ 1.63
Ccdc188F6WEU2 Gm14523-201ENSMUST00000117260 558 ntBASIC25.25■■□□□ 1.63
Ccdc188F6WEU2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.25■■□□□ 1.63
Ccdc188F6WEU2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ccdc188F6WEU2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ccdc188F6WEU2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ccdc188F6WEU2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ccdc188F6WEU2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ccdc188F6WEU2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ccdc188F6WEU2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ccdc188F6WEU2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ccdc188F6WEU2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ccdc188F6WEU2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.22■■□□□ 1.63
Ccdc188F6WEU2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ccdc188F6WEU2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ccdc188F6WEU2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.19■■□□□ 1.62
Ccdc188F6WEU2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ccdc188F6WEU2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ccdc188F6WEU2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc188F6WEU2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc188F6WEU2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc188F6WEU2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc188F6WEU2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc188F6WEU2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ccdc188F6WEU2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ccdc188F6WEU2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc188F6WEU2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc188F6WEU2 Gm5921-201ENSMUST00000075898 882 ntBASIC25.15■■□□□ 1.62
Ccdc188F6WEU2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ccdc188F6WEU2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc188F6WEU2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc188F6WEU2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc188F6WEU2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc188F6WEU2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.11■■□□□ 1.61
Ccdc188F6WEU2 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.11■■□□□ 1.61
Ccdc188F6WEU2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc188F6WEU2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc188F6WEU2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.1■■□□□ 1.61
Ccdc188F6WEU2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.1■■□□□ 1.61
Ccdc188F6WEU2 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.1■■□□□ 1.61
Ccdc188F6WEU2 Gm45364-201ENSMUST00000210883 159 ntBASIC25.1■■□□□ 1.61
Ccdc188F6WEU2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc188F6WEU2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.1■■□□□ 1.61
Ccdc188F6WEU2 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.09■■□□□ 1.61
Ccdc188F6WEU2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Ccdc188F6WEU2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Ccdc188F6WEU2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Ccdc188F6WEU2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc188F6WEU2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc188F6WEU2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ccdc188F6WEU2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ccdc188F6WEU2 Gm30023-201ENSMUST00000197970 889 ntBASIC25.06■■□□□ 1.6
Ccdc188F6WEU2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ccdc188F6WEU2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ccdc188F6WEU2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Ccdc188F6WEU2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 198.5 ms