Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ube4aE9Q735 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.52■■■□□ 2.32
Ube4aE9Q735 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
Ube4aE9Q735 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Ube4aE9Q735 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.51■■■□□ 2.31
Ube4aE9Q735 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ube4aE9Q735 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ube4aE9Q735 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ube4aE9Q735 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.49■■■□□ 2.31
Ube4aE9Q735 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ube4aE9Q735 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ube4aE9Q735 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ube4aE9Q735 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ube4aE9Q735 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ube4aE9Q735 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ube4aE9Q735 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29.46■■■□□ 2.31
Ube4aE9Q735 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ube4aE9Q735 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Ube4aE9Q735 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29.44■■■□□ 2.3
Ube4aE9Q735 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ube4aE9Q735 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ube4aE9Q735 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ube4aE9Q735 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.42■■■□□ 2.3
Ube4aE9Q735 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.42■■■□□ 2.3
Ube4aE9Q735 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Ube4aE9Q735 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Ube4aE9Q735 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ube4aE9Q735 Particl-201ENSMUST00000205370 1560 ntBASIC29.39■■■□□ 2.3
Ube4aE9Q735 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ube4aE9Q735 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.37■■■□□ 2.29
Ube4aE9Q735 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC29.37■■■□□ 2.29
Ube4aE9Q735 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ube4aE9Q735 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
Ube4aE9Q735 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ube4aE9Q735 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.35■■■□□ 2.29
Ube4aE9Q735 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
Ube4aE9Q735 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
Ube4aE9Q735 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ube4aE9Q735 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ube4aE9Q735 Zxda-201ENSMUST00000117281 2621 ntBASIC29.32■■■□□ 2.28
Ube4aE9Q735 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Ube4aE9Q735 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ube4aE9Q735 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
Ube4aE9Q735 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ube4aE9Q735 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ube4aE9Q735 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ube4aE9Q735 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ube4aE9Q735 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ube4aE9Q735 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ube4aE9Q735 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ube4aE9Q735 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Ube4aE9Q735 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
Ube4aE9Q735 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29.26■■■□□ 2.27
Ube4aE9Q735 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ube4aE9Q735 Gm11175-201ENSMUST00000116172 543 ntBASIC29.25■■■□□ 2.27
Ube4aE9Q735 AC167019.3-201ENSMUST00000228225 1266 ntBASIC29.25■■■□□ 2.27
Ube4aE9Q735 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.25■■■□□ 2.27
Ube4aE9Q735 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ube4aE9Q735 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Ube4aE9Q735 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Ube4aE9Q735 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ube4aE9Q735 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ube4aE9Q735 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Ube4aE9Q735 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ube4aE9Q735 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ube4aE9Q735 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ube4aE9Q735 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
Ube4aE9Q735 Mir6538-201ENSMUST00000183713 110 ntBASIC29.18■■■□□ 2.26
Ube4aE9Q735 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ube4aE9Q735 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
Ube4aE9Q735 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ube4aE9Q735 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ube4aE9Q735 Gm6311-201ENSMUST00000073790 878 ntBASIC29.16■■■□□ 2.26
Ube4aE9Q735 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ube4aE9Q735 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Ube4aE9Q735 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29.15■■■□□ 2.26
Ube4aE9Q735 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ube4aE9Q735 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Ube4aE9Q735 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.14■■■□□ 2.26
Ube4aE9Q735 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ube4aE9Q735 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.13■■■□□ 2.25
Ube4aE9Q735 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ube4aE9Q735 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Ube4aE9Q735 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29.11■■■□□ 2.25
Ube4aE9Q735 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ube4aE9Q735 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Ube4aE9Q735 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ube4aE9Q735 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.08■■■□□ 2.25
Ube4aE9Q735 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
Ube4aE9Q735 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.08■■■□□ 2.25
Ube4aE9Q735 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.08■■■□□ 2.25
Ube4aE9Q735 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC29.07■■■□□ 2.24
Ube4aE9Q735 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Ube4aE9Q735 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.06■■■□□ 2.24
Ube4aE9Q735 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ube4aE9Q735 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.04■■■□□ 2.24
Ube4aE9Q735 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.04■■■□□ 2.24
Ube4aE9Q735 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ube4aE9Q735 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Ube4aE9Q735 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 263.9 ms